Enhancing Conventional PCR for Detection of Erwinia amylovora

Polymerase chain reaction (PCR) methods, including conventional PCR (cPCR) and quantitative real-time PCR (qRT-PCR), with both plasmid- and chromosome-targeting primers, are currently the most reliable methods for detecting Erwinia amylovora due to their high sensitivity and specificity. Despite qRT-PCR’s quantitative advantage, cPCR remains an attractive method to detect this bacterium in initial screenings of suspected host plants, as it is cost-effective and does not require skilled personnel in well-equipped laboratories. This study aimed to significantly improve cPCR robustness via application of bovine serum albumin (BSA) as a PCR facilitator, with a modified EaF/R primer pair, as previously reported. Experiments have shown that simple supplementation with BSA (10 mg/ml) enhances cPCR reactions using templates such as genomic DNA, bacterial cells, and infected symptomless host organs, including immature apple fruits and seedlings, with EaF/R primers. The cPCR method described in this study is simple, specific, and reliable, and can be applied in routine assays to diagnose fire blight.

Authors

Publication Details

Journal
Research in Plant Disease
Published
2024-09-30
DOI
https://doi.org/10.5423/rpd.2024.30.3.294
Primary Topic
Plant Pathogenic Bacteria Studies
Type
article
Field-Weighted Citation Impact
0.00

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article

Enhancing Conventional PCR for Detection of Erwinia amylovora

Dong Hyuk Choi, Duck Hwan Park, Yeon Ju Kim, Jeong Ho Choi et al.
Research in Plant Disease
Plant Pathogenic Bacteria Studies
article

Enhancing Conventional PCR for Detection of Erwinia amylovora

Dong Hyuk Choi, Duck Hwan Park, Yeon Ju Kim, Jeong Ho Choi, Hyun Ju Choi
article en

Abstract

Polymerase chain reaction (PCR) methods, including conventional PCR (cPCR) and quantitative real-time PCR (qRT-PCR), with both plasmid- and chromosome-targeting primers, are currently the most reliable methods for detecting Erwinia amylovora due to their high sensitivity and specificity. Despite qRT-PCR’s quantitative advantage, cPCR remains an attractive method to detect this bacterium in initial screenings of suspected host plants, as it is cost-effective and does not require skilled personnel in well-equipped laboratories. This study aimed to significantly improve cPCR robustness via application of bovine serum albumin (BSA) as a PCR facilitator, with a modified EaF/R primer pair, as previously reported. Experiments have shown that simple supplementation with BSA (10 mg/ml) enhances cPCR reactions using templates such as genomic DNA, bacterial cells, and infected symptomless host organs, including immature apple fruits and seedlings, with EaF/R primers. The cPCR method described in this study is simple, specific, and reliable, and can be applied in routine assays to diagnose fire blight.

Research in Plant DiseaseVol. 30(3)
Rural Development Administration
Openalex Percentile: Top 91%
Plant Pathogenic Bacteria Studies
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Enhancing Conventional PCR for Detection of Erwinia amylovora — Dong Hyuk Choi, Duck Hwan Park, et al. · Research in Plant Disease (2024) | TGRS Research Map | TGRS