Automated analysis of a novel object recognition test in mice using image processing and machine learning

The novel object recognition test (NORT) is one of the most commonly employed behavioral tests in experimental animals designed to evaluate an animal's interest in and recognition of novelty. However, manual procedures, which rely on researchers' observations, prevent high throughput analysis. In this study, we developed an automated analysis method for NORT utilizing machine learning-assisted exploratory behavior detection. We recorded the exploratory behavior of the mice using a video camera. The coordinates of the mouse nose and tail base in recorded video files were detected using a pre-trained machine learning model, DeepLabCut. Each video was then segmented into frame images, which were categorized into "exploratory," or "non-exploratory" frames based on manual observation. Mouse feature vectors were calculated as vectors from the nose to the vertices of the object and were utilized for SVM training. The trained SVM effectively detected exploratory behaviors, showing a strong correlation with human observer assessments. Upon application to NORT, the duration of mouse exploratory behavior towards objects predicted by the SVM exhibited a significant correlation with the assessments made by human observers. The novelty discrimination index derived from the SVM predictions also aligned well with that from human observations.

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Publication Details

Journal
Behavioural Brain Research
Published
2024-09-30
DOI
https://doi.org/10.1016/j.bbr.2024.115278
Citations
6
Primary Topic
Zebrafish Biomedical Research Applications
Type
article
Field-Weighted Citation Impact
1.96

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article

Automated analysis of a novel object recognition test in mice using image processing and machine learning

Yoshihiro Kitagawa, Takahisa Murata, Kazuo Sasagawa, Chihiro Okuma et al.
6 citations
Behavioural Brain Research
Zebrafish Biomedical Research Applications
1.96
article

Automated analysis of a novel object recognition test in mice using image processing and machine learning

Yoshihiro Kitagawa, Takahisa Murata, Kazuo Sasagawa, Chihiro Okuma, Takashi Minato, Takahiro Hata, Misato Kida, Koji Kobayashi, Katsuya Sakimura, Takuya Kishi
article en
6 citations

Abstract

The novel object recognition test (NORT) is one of the most commonly employed behavioral tests in experimental animals designed to evaluate an animal's interest in and recognition of novelty. However, manual procedures, which rely on researchers' observations, prevent high throughput analysis. In this study, we developed an automated analysis method for NORT utilizing machine learning-assisted exploratory behavior detection. We recorded the exploratory behavior of the mice using a video camera. The coordinates of the mouse nose and tail base in recorded video files were detected using a pre-trained machine learning model, DeepLabCut. Each video was then segmented into frame images, which were categorized into "exploratory," or "non-exploratory" frames based on manual observation. Mouse feature vectors were calculated as vectors from the nose to the vertices of the object and were utilized for SVM training. The trained SVM effectively detected exploratory behaviors, showing a strong correlation with human observer assessments. Upon application to NORT, the duration of mouse exploratory behavior towards objects predicted by the SVM exhibited a significant correlation with the assessments made by human observers. The novelty discrimination index derived from the SVM predictions also aligned well with that from human observations.

Behavioural Brain ResearchVol. 476
Tokyo University of Agriculture (JP), Japan Tobacco (United States) (US), Japan Tobacco (Japan) (JP), The University of Tokyo (JP)
Japan Society for the Promotion of Science
Openalex Percentile: Top 15%
Zebrafish Biomedical Research Applications
1.96
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