Genome‐Enabled Parameterization Enhances Model Simulation of CH<sub>4</sub> Cycling in Four Natural Wetlands
Abstract Microbial processes are crucial in producing and oxidizing biological methane (CH 4 ) in natural wetlands. Therefore, modeling methanogenesis and methanotrophy is advantageous for accurately projecting CH 4 cycling. Utilizing the CLM‐Microbe model, which explicitly represents the growth and death of methanogens and methanotrophs, we demonstrate that genome‐enabled model parameterization improves model performance in four natural wetlands. Compared to the default model parameterization against CH 4 flux, genomic‐enabled model parameterization added another contain on microbial biomass, notably enhancing the precision of simulated CH 4 flux. Specifically, the coefficient of determination ( R 2 ) increased from 0.45 to 0.74 for Sanjiang Plain, from 0.78 to 0.89 for Changbai Mountain, and from 0.35 to 0.54 for Sallie's Fen, respectively. A drop in R 2 was observed for the Dajiuhu nature wetland, primarily caused by scatter data points. Theil's coefficient (U) and model efficiency (ME) confirmed the model performance from default parameterization to genome‐enabled model parameterization. Compared with the model solely calibrated to surface CH 4 flux, additional constraints of functional gene data led to better CH 4 seasonality; meanwhile, genome‐enabled model parameterization established more robust associations between simulated CH 4 production rates and environmental factors. Sensitivity analysis underscored the pivotal role of microbial physiology in governing CH 4 flux. This genome‐enabled model parameterization offers a valuable promise to integrate fast‐cumulating genomic data with CH 4 models to better understand microbial roles in CH 4 in the era of climate change.
Authors
- Fenghui Yuan (ORCID: https://orcid.org/0000-0003-1004-873X)
- Jianzhao Liu (ORCID: https://orcid.org/0000-0001-9465-6075)
- Xiaofeng Xu (ORCID: https://orcid.org/0000-0002-6553-6514)
- Liyuan He (ORCID: https://orcid.org/0000-0003-3326-9260)
- Yunjiang Zuo (ORCID: https://orcid.org/0000-0003-4810-678X)
- Yihui Wang (ORCID: https://orcid.org/0000-0001-7481-1859)
- Kexin Li (ORCID: https://orcid.org/0000-0002-9123-1394)
- Lihua Zhang (ORCID: https://orcid.org/0000-0003-0467-4347)
- Ning Chen (ORCID: https://orcid.org/0000-0002-9405-6229)
- Nannan Wang (ORCID: https://orcid.org/0000-0002-9013-0612)
- Changchun Song (ORCID: https://orcid.org/0000-0002-9306-8404)
- Ziyu Guo (ORCID: https://orcid.org/0000-0002-8389-4729)
- Li Sun
Institutions
- Minzu University of China (CN)
- Chinese Academy of Sciences (CN)
- San Diego State University (US)
- Northeast Institute of Geography and Agroecology (CN)
- University of Chinese Academy of Sciences (CN)
Publication Details
- Journal
- Journal of Advances in Modeling Earth Systems
- Published
- 2024-09-28
- DOI
- https://doi.org/10.1029/2023ms004139
- Citations
- 7
- Primary Topic
- Atmospheric and Environmental Gas Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 1.98
Funders
- National Natural Science Foundation of China