Clarifying new molecular subtyping and precise treatment of melanoma based on disulfidptosis-related lncRNA signature

Disulfidptosis, the newest form of programmed cell death, is closely associated with the immune microenvironment of cancer cells. Long non-coding RNA (lncRNA) has also been found to play a crucial role in melanoma. However, the role of disulfidptosis-related lncRNA in melanoma remains unclear. Through bioinformatic analysis of the transcriptional, clinical, and pathological data from the TCGA-SKCM (The Cancer Genome Atlas-Skin cutaneous melanoma) database, we established a 2-Disulfidptosis-related lncRNA (DRL) prognostic model and a novel molecular subtype for melanoma. The survival and ROC curves of the 2-DRL prognostic model demonstrated its strong efficacy in predicting the prognosis of melanoma. The high-risk group of melanoma exhibited a significant decrease in ESTIMATEScore, ImmuneScore, and StromalScore, indicative of pronounced immune suppression and exhaustion. Subgroup C2 of melanoma displayed an immune-activated state, while subgroups C1 and C3 showed immune suppression and exhaustion, potentially leading to poorer prognosis. Subgroup C1 demonstrated better sensitivity to Zoledronate, UMI-77, Nilotinib, and Cytarabine. Subgroup C2 exhibited greater sensitivity to Ribociclib, XAV939, Topotecan, and Ruxolitinib. Subgroup C3 showed higher sensitivity to VX-11e, Ulixertinib, Trametinib, and Afatinib. This study revealed the immune microenvironment status and targeted drug sensitivity in melanoma patients with different risk scores and molecular subtypes, offering valuable guidance for clinical treatment and identifying significant DRL targets for future in-depth research.

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Publication Details

Journal
European journal of medical research
Published
2024-09-28
DOI
https://doi.org/10.1186/s40001-024-02035-8
Citations
3
Primary Topic
RNA regulation and disease
Type
article
Field-Weighted Citation Impact
0.70

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article

Clarifying new molecular subtyping and precise treatment of melanoma based on disulfidptosis-related lncRNA signature

Lei Yue, Shukang Li, Yihang Gong, Yilin Song et al.
3 citations
European journal of medical research
RNA regulation and disease
0.70
article

Clarifying new molecular subtyping and precise treatment of melanoma based on disulfidptosis-related lncRNA signature

Lei Yue, Shukang Li, Yihang Gong, Yilin Song, Pei Liu, Long Wang, Yang Jiang
article en
3 citations

Abstract

Disulfidptosis, the newest form of programmed cell death, is closely associated with the immune microenvironment of cancer cells. Long non-coding RNA (lncRNA) has also been found to play a crucial role in melanoma. However, the role of disulfidptosis-related lncRNA in melanoma remains unclear. Through bioinformatic analysis of the transcriptional, clinical, and pathological data from the TCGA-SKCM (The Cancer Genome Atlas-Skin cutaneous melanoma) database, we established a 2-Disulfidptosis-related lncRNA (DRL) prognostic model and a novel molecular subtype for melanoma. The survival and ROC curves of the 2-DRL prognostic model demonstrated its strong efficacy in predicting the prognosis of melanoma. The high-risk group of melanoma exhibited a significant decrease in ESTIMATEScore, ImmuneScore, and StromalScore, indicative of pronounced immune suppression and exhaustion. Subgroup C2 of melanoma displayed an immune-activated state, while subgroups C1 and C3 showed immune suppression and exhaustion, potentially leading to poorer prognosis. Subgroup C1 demonstrated better sensitivity to Zoledronate, UMI-77, Nilotinib, and Cytarabine. Subgroup C2 exhibited greater sensitivity to Ribociclib, XAV939, Topotecan, and Ruxolitinib. Subgroup C3 showed higher sensitivity to VX-11e, Ulixertinib, Trametinib, and Afatinib. This study revealed the immune microenvironment status and targeted drug sensitivity in melanoma patients with different risk scores and molecular subtypes, offering valuable guidance for clinical treatment and identifying significant DRL targets for future in-depth research.

European journal of medical researchVol. 29(1)
Hubei University of Medicine (CN), Sun Yat-sen University (CN), Shantou University (CN), Zhongshan People's Hospital (CN), Taihe Hospital (CN), Shantou University Medical College (CN), Shenzhen Bao'an District People's Hospital (CN), Third Affiliated Hospital of Sun Yat-sen University (CN)
National Natural Science Foundation of China, China Postdoctoral Science Foundation
Zero hunger
Openalex Percentile: Top 30%
RNA regulation and disease
0.70
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