Crystals of Organic Acid–Base Complexes Defy the Δp<i>K</i><sub>a</sub> Rule Under Compression

Crystals of organic acid–base adducts are major components in active pharmaceutical ingredients. These 1:1 adducts either form a cocrystal with a hydrogen-bonded motif or a salt by transfer of a proton from the acid to the base. As a rule of thumb, if the difference in pKa between the protonated base and the acid (ΔpKa) is < −1, a cocrystal is expected, while ΔpKa > 4 leads to a salt, and in the intermediate zone (−1 ≤ ΔpKa ≤ 4) both cocrystal and salt are observed. The preferred crystalline form for 1:1 adducts of pyridine, pyridazine, pyrazine, and furan with formic acid is elucidated using genetic algorithm-assisted first-principles crystal structure predictions. In agreement with the ΔpKa rule, all the adducts stabilize as H-bonded cocrystals under ambient pressure. However, under isotropic pressure, formic acid transfers the protons to the three nitrogenous bases, forming salts of pyridinium formate, pyridazinium formate, and pyrazinium formate. External pressure is found to dictate the cocrystal–salt equilibrium. Critical pressure (Pc) required to induce cocrystal → salt conversion for formic acid··· pyridine/pyridazine/pyrazine is 3, 5, and 15 GPa, respectively. Compression is shown to enhance the electrostatic interactions between the molecules, leading to additional stabilization of the ionic configurations, namely, N+-H···O– in salts vis-à-vis the neutral N–H···O motifs in the cocrystals. Violating the ΔpKa rule, Pc overcomes the free energy required for the proton transfer (ΔGPT) to stabilize the salts. The very high ΔGPT = 177.9 kcal/mol for the furan···formic acid adduct prevents salt formation even at 30 GPa. Apart from thermodynamic and kinetic control during crystallization, pressure acts as a key control for organic acid–base adducts.

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Publication Details

Journal
The Journal of Physical Chemistry C
Published
2024-09-27
DOI
https://doi.org/10.1021/acs.jpcc.4c05301
Citations
4
Primary Topic
Crystallography and molecular interactions
Type
article
Field-Weighted Citation Impact
1.78

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article

Crystals of Organic Acid–Base Complexes Defy the ΔpKa Rule Under Compression

Saied Md Pratik, Ayan Datta, Shovan Das
4 citations
The Journal of Physical Chemistry C
Crystallography and molecular interactions
1.78
article

Crystals of Organic Acid–Base Complexes Defy the ΔpKa Rule Under Compression

Saied Md Pratik, Ayan Datta, Shovan Das
article en
4 citations

Abstract

Crystals of organic acid–base adducts are major components in active pharmaceutical ingredients. These 1:1 adducts either form a cocrystal with a hydrogen-bonded motif or a salt by transfer of a proton from the acid to the base. As a rule of thumb, if the difference in pKa between the protonated base and the acid (ΔpKa) is < −1, a cocrystal is expected, while ΔpKa > 4 leads to a salt, and in the intermediate zone (−1 ≤ ΔpKa ≤ 4) both cocrystal and salt are observed. The preferred crystalline form for 1:1 adducts of pyridine, pyridazine, pyrazine, and furan with formic acid is elucidated using genetic algorithm-assisted first-principles crystal structure predictions. In agreement with the ΔpKa rule, all the adducts stabilize as H-bonded cocrystals under ambient pressure. However, under isotropic pressure, formic acid transfers the protons to the three nitrogenous bases, forming salts of pyridinium formate, pyridazinium formate, and pyrazinium formate. External pressure is found to dictate the cocrystal–salt equilibrium. Critical pressure (Pc) required to induce cocrystal → salt conversion for formic acid··· pyridine/pyridazine/pyrazine is 3, 5, and 15 GPa, respectively. Compression is shown to enhance the electrostatic interactions between the molecules, leading to additional stabilization of the ionic configurations, namely, N+-H···O– in salts vis-à-vis the neutral N–H···O motifs in the cocrystals. Violating the ΔpKa rule, Pc overcomes the free energy required for the proton transfer (ΔGPT) to stabilize the salts. The very high ΔGPT = 177.9 kcal/mol for the furan···formic acid adduct prevents salt formation even at 30 GPa. Apart from thermodynamic and kinetic control during crystallization, pressure acts as a key control for organic acid–base adducts.

The Journal of Physical Chemistry CVol. 128(40)
University of Arizona (US), Indian Association for the Cultivation of Science (IN)
Department of Science and Technology, Ministry of Science and Technology, India, Science and Engineering Research Board
Openalex Percentile: Top 13%
Crystallography and molecular interactions
1.78
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