DAPlankton: Benchmark Dataset For Multi-Instrument Plankton Recognition Via Fine-Grained Domain Adaptation

Plankton recognition provides novel possibilities to study various environmental aspects and an interesting real-world context to develop domain adaptation (DA) methods. Different imaging instruments cause domain shift between datasets hampering the development of general plankton recognition methods. A promising remedy for this is DA allowing to adapt a model trained on one instrument to other instruments. In this paper, we present a new DA dataset called DAPlankton which consists of phytoplankton images obtained with different instruments. Phytoplankton provides a challenging DA problem due to the fine-grained nature of the task and high class imbalance in real-world datasets. DAPlankton consists of two subsets. $\mathrm{DAPlankton}_{\text {LAB }}$ contains images of cultured phytoplankton providing a balanced dataset with minimal label uncertainty. $\mathrm{DAPlankton}_{\text {SEA }}$ consists of images collected from the Baltic Sea providing challenging real-world data with large intra-class variance and class imbalance. We further present a benchmark comparison of three widely used DA methods.

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Publication Details

Published
2024-09-27
DOI
https://doi.org/10.1109/icip51287.2024.10648228
Citations
4
Primary Topic
Underwater Acoustics Research
Type
article
Field-Weighted Citation Impact
1.92

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article

DAPlankton: Benchmark Dataset For Multi-Instrument Plankton Recognition Via Fine-Grained Domain Adaptation

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4 citations
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article

DAPlankton: Benchmark Dataset For Multi-Instrument Plankton Recognition Via Fine-Grained Domain Adaptation

Heikki Kälviäinen, Lumi Haraguchi, Tuomas Eerola, Jyri Seppälä, Daniel Batrakhanov, Lasse Lensu, Sanna Suikkanen, Kaisa Kraft, María Teresa Camarena‐Gómez
article en
4 citations

Abstract

Plankton recognition provides novel possibilities to study various environmental aspects and an interesting real-world context to develop domain adaptation (DA) methods. Different imaging instruments cause domain shift between datasets hampering the development of general plankton recognition methods. A promising remedy for this is DA allowing to adapt a model trained on one instrument to other instruments. In this paper, we present a new DA dataset called DAPlankton which consists of phytoplankton images obtained with different instruments. Phytoplankton provides a challenging DA problem due to the fine-grained nature of the task and high class imbalance in real-world datasets. DAPlankton consists of two subsets. $\mathrm{DAPlankton}_{\text {LAB }}$ contains images of cultured phytoplankton providing a balanced dataset with minimal label uncertainty. $\mathrm{DAPlankton}_{\text {SEA }}$ consists of images collected from the Baltic Sea providing challenging real-world data with large intra-class variance and class imbalance. We further present a benchmark comparison of three widely used DA methods.

Finnish Environment Institute (FI), Instituto Español de Oceanografía (ES), Centro Oceanográfico de Málaga, Lappeenranta-Lahti University of Technology (FI)
Academy of Finland, HORIZON EUROPE Framework Programme
Climate action
Openalex Percentile: Top 15%
Underwater Acoustics Research
1.92
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