Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea

An aerobic, Gram-stain-negative, non-motile, non-spore-forming, short rod-shaped bacterial strain, designated NCCP 15609 <sup>T</sup>, was isolated from the blood sample of a patient in the Republic of Korea. The strain was identified as Brevundimonas diminuta using MALDI-TOF. A phylogenetic tree constructed using 16S rRNA gene sequences revealed that the isolate was of the genus Brevundimonas with 99.8% similarity to B. naejangsanensis. The strain NCCP 15609<sup>T</sup> genome consisted of one contig with 3,063,090 bp, and had a G+C content of 67.4%. The genome contained 2,949 protein-coding sequences, 52 tRNAs, and 6 rRNAs. The DNA-DNA hybridisation between NCCP 15609<sup>T</sup> and B. naejangsanensis yielded 92.5% and 49.5% ± 2.6%, respectively, using the average nucleotide identity (ANI) and digital DNA-DNA hybridisation (dDDH). The predominant fatty acids of strain NCCP 15609<sup>T</sup> were summed feature 8 (C<sub>18:1</sub> ω7c/C<sub>18:1</sub> ω6c) and C<sub>16:0</sub>. The isolate contained polar lipids and quinone, corresponding to phosphatidylglycerol, 1,2-di-O-acyl-3-O-[D-glycopyranosyl (1 → 4)-α-D-glucopyranuronosyl] glycerol, and ubiquinone-10, respectively. Based on its phylogenetic, physiological, and chemotaxonomic characteristics, we suggest that NCCP 15609<sup>T</sup> represents a novel pathogen resource of the genus Brevundimonas and propose to name it Brevundimonas sanguinis sp. nov. The type strain is NCCP 15609<sup>T</sup> (= DSM 116005<sup>T</sup>).

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Antonie van Leeuwenhoek
Published
2024-09-26
DOI
https://doi.org/10.1007/s10482-024-02020-5
Primary Topic
Genomics and Phylogenetic Studies
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article
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article

Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea

Ji Hee Lee, Ye-Won An, Su Yeon Kim
Antonie van Leeuwenhoek
Genomics and Phylogenetic Studies
article

Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea

Ji Hee Lee, Ye-Won An, Su Yeon Kim
article en

Abstract

An aerobic, Gram-stain-negative, non-motile, non-spore-forming, short rod-shaped bacterial strain, designated NCCP 15609 <sup>T</sup>, was isolated from the blood sample of a patient in the Republic of Korea. The strain was identified as Brevundimonas diminuta using MALDI-TOF. A phylogenetic tree constructed using 16S rRNA gene sequences revealed that the isolate was of the genus Brevundimonas with 99.8% similarity to B. naejangsanensis. The strain NCCP 15609<sup>T</sup> genome consisted of one contig with 3,063,090 bp, and had a G+C content of 67.4%. The genome contained 2,949 protein-coding sequences, 52 tRNAs, and 6 rRNAs. The DNA-DNA hybridisation between NCCP 15609<sup>T</sup> and B. naejangsanensis yielded 92.5% and 49.5% ± 2.6%, respectively, using the average nucleotide identity (ANI) and digital DNA-DNA hybridisation (dDDH). The predominant fatty acids of strain NCCP 15609<sup>T</sup> were summed feature 8 (C<sub>18:1</sub> ω7c/C<sub>18:1</sub> ω6c) and C<sub>16:0</sub>. The isolate contained polar lipids and quinone, corresponding to phosphatidylglycerol, 1,2-di-O-acyl-3-O-[D-glycopyranosyl (1 → 4)-α-D-glucopyranuronosyl] glycerol, and ubiquinone-10, respectively. Based on its phylogenetic, physiological, and chemotaxonomic characteristics, we suggest that NCCP 15609<sup>T</sup> represents a novel pathogen resource of the genus Brevundimonas and propose to name it Brevundimonas sanguinis sp. nov. The type strain is NCCP 15609<sup>T</sup> (= DSM 116005<sup>T</sup>).

Antonie van LeeuwenhoekVol. 118(1)
Korea Disease Control and Prevention Agency (KR)
Jeonbuk National University, Korea National Institute of Health
Openalex Percentile: Top 85%
Genomics and Phylogenetic Studies
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Florfenicol-resistant Brevundimonas sanguinis sp. nov., a novel bacterium isolated from patient blood in South Korea — Ji Hee Lee, Ye-Won An, et al. · Antonie van Leeuwenhoek (2024) | TGRS Research Map | TGRS