Direct asymmetric synthesis of β-branched aromatic α-amino acids using engineered phenylalanine ammonia lyases
β-Branched aromatic α-amino acids are valuable building blocks in natural products and pharmaceutically active compounds. However, their chemical or enzymatic synthesis is challenging due to the presence of two stereocenters. We design phenylalanine ammonia lyases (PAL) variants for the direct asymmetric synthesis of β-branched aromatic α-amino acids. Based on extensive computational analyses, we unravel the enigma behind PAL's inability to accept β-methyl cinnamic acid (β-MeCA) as substrate and achieve the synthesis of the corresponding amino acids of β-MeCA and analogs using a double (PcPAL-L256V-I460V) and a triple mutant (PcPAL-F137V-L256V-I460V). The reactions are scaled-up using an optimized E. coli based whole-cell biotransformation system to produce ten β-branched phenylalanine analogs with high diastereoselectivity (dr > 20:1) and enantioselectivity (ee > 99.5%) in yields ranging from 41-71%. Moreover, we decipher the mechanism of PcPAL-L256V-I460V for the acceptance of β-MeCA and converting it with excellent stereoselectivity by computational simulations. Thus, this study offers an efficient method for synthesizing β-branched aromatic α-amino acids.
Authors
- Yuhui Sun (ORCID: https://orcid.org/0000-0001-5720-9620)
- Ya Fang Wu (ORCID: https://orcid.org/0000-0002-9582-252X)
- Yu‐Fei Ao (ORCID: https://orcid.org/0000-0002-9415-2181)
- Uwe T. Bornscheuer (ORCID: https://orcid.org/0000-0003-0685-2696)
- Shuke Wu (ORCID: https://orcid.org/0000-0003-0914-9277)
- Chenghai Sun (ORCID: https://orcid.org/0000-0002-9221-262X)
- Guifa Zhai (ORCID: https://orcid.org/0000-0001-9659-8323)
- Guangjun Li (ORCID: https://orcid.org/0000-0003-2054-1771)
- Ren Wei (ORCID: https://orcid.org/0000-0003-3876-1350)
- Baoming Chen (ORCID: https://orcid.org/0000-0003-1891-8752)
- Yannik Brack (ORCID: https://orcid.org/0000-0003-2049-9761)
- Dong Yi (ORCID: https://orcid.org/0000-0003-2594-0464)
- Gen Lu (ORCID: https://orcid.org/0000-0001-9702-6167)
Institutions
- Huazhong Agricultural University (CN)
- Universitätsmedizin Greifswald (DE)
- Universität Greifswald (DE)
- Shanghai Institute of Pharmaceutical Industry (CN)
- Huazhong University of Science and Technology (CN)
Publication Details
- Journal
- Nature Communications
- Published
- 2024-09-26
- DOI
- https://doi.org/10.1038/s41467-024-52613-x
- Citations
- 15
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 3.51
Funders
- European Commission
- Huazhong University of Science and Technology
- Horizon 2020 Framework Programme