Genetic Diversity of Common Bean (Phaseolus vulgaris L.) Landraces Based on Morphological Traits and Molecular Markers

The objective of this study was to evaluate the genetic diversity among traditional common bean accessions through morphological descriptors and molecular markers. Sixty-seven common bean accessions from the Germplasm bank of the Instituto Federal of Espírito Santo-Campus de Alegre were evaluated. For this, 25 specific morphological descriptors were used, namely 12 quantitative and 13 qualitative ones. A diversity analysis based on morphological descriptors was carried out using the Gower algorithm. For molecular characterization, 23 ISSR primers were used to estimate dissimilarity using the Jaccard Index. Based on the dendrograms obtained by the UPGMA method, for morphological and molecular characterization, high genetic variability was observed between the common bean genotypes studied, evidenced by cophenetic correlation values in the order of 0.99, indicating an accurate representation of the dissimilarity matrix by the UPGMA clustering. In the morphological characterization, high phenotypic diversity was observed between the accessions, with grains of different shapes, colors, and sizes, and the accessions were grouped into nine distinct groups. Molecular characterization was efficient in separating the genotypes in the Andean and Mesoamerican groups, with the 23 ISSR primers studied generating an average of 6.35 polymorphic bands. The work identified divergent accessions that can serve different market niches, which can be indicated as parents to form breeding programs in order to obtain progenies with high genetic variability.

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Publication Details

Journal
Plants
Published
2024-09-15
DOI
https://doi.org/10.3390/plants13182584
Citations
13
Primary Topic
Plant pathogens and resistance mechanisms
Type
article
Field-Weighted Citation Impact
7.79

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article

Genetic Diversity of Common Bean (Phaseolus vulgaris L.) Landraces Based on Morphological Traits and Molecular Markers

Maurício Novaes Souza, Talles de Oliveira Santos, José Dias de Souza Neto, Evaldo de Paula et al.
13 citations
Plants
Plant pathogens and resistance mechanisms
7.79
article

Genetic Diversity of Common Bean (Phaseolus vulgaris L.) Landraces Based on Morphological Traits and Molecular Markers

Maurício Novaes Souza, Talles de Oliveira Santos, José Dias de Souza Neto, Evaldo de Paula, Aparecida de Fátima Madella de Oliveira, Alexandre Cristiano Santos Júnior, Monique Moreira Moulin, Cíntia dos Santos Bento, Samy Pimenta, Rafael Nunes de Almeida, Jardel Oliveira Santos, Sheila Cristina Prucoli Posse, Elaine Manelli Riva-Souza
article en
13 citations

Abstract

The objective of this study was to evaluate the genetic diversity among traditional common bean accessions through morphological descriptors and molecular markers. Sixty-seven common bean accessions from the Germplasm bank of the Instituto Federal of Espírito Santo-Campus de Alegre were evaluated. For this, 25 specific morphological descriptors were used, namely 12 quantitative and 13 qualitative ones. A diversity analysis based on morphological descriptors was carried out using the Gower algorithm. For molecular characterization, 23 ISSR primers were used to estimate dissimilarity using the Jaccard Index. Based on the dendrograms obtained by the UPGMA method, for morphological and molecular characterization, high genetic variability was observed between the common bean genotypes studied, evidenced by cophenetic correlation values in the order of 0.99, indicating an accurate representation of the dissimilarity matrix by the UPGMA clustering. In the morphological characterization, high phenotypic diversity was observed between the accessions, with grains of different shapes, colors, and sizes, and the accessions were grouped into nine distinct groups. Molecular characterization was efficient in separating the genotypes in the Andean and Mesoamerican groups, with the 23 ISSR primers studied generating an average of 6.35 polymorphic bands. The work identified divergent accessions that can serve different market niches, which can be indicated as parents to form breeding programs in order to obtain progenies with high genetic variability.

PlantsVol. 13(18)
Universidade Federal do Piauí (BR), State University of Norte Fluminense (BR), Instituto Federal do Espírito Santo (BR), Instituto Capixaba de Pesquisa, Assistência Técnica e Extensão Rural (BR), Universidade Estadual de Montes Claros (BR), Universidade Federal do Espírito Santo (BR)
Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro
Life in Land
Openalex Percentile: Top 3%
Plant pathogens and resistance mechanisms
7.79
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