IDENTIFICATION OF COMMON DIFFERENTIALLY EXPRESSED GENES (DEGS) AND HUB GENES IN NEURODEGENERATIVE DISEASES: A COMPARATIVE STUDY OF ALZHEIMER'S AND PARKINSON'S USING EXTENSIVE DATA MINING

Alzheimer's disease (AD) and Parkinson's disease (PD) are the two most prevalent neurodegenerative disorders, sharing overlapping pathophysiological mechanisms. This study aims to identify common differentially expressed genes (DEGs) and hub genes between AD and PD using publicly available datasets from the Gene Expression Omnibus (GEO). We utilized datasets GSE5281 for AD and GSE49036 for PD to conduct a comparative analysis. After normalization and differential expression analysis, common DEGs were identified, followed by protein-protein interaction (PPI) network construction using the STRING database. Hub genes were extracted through Cytoscape's cytoHubba plugin based on centrality measures. The results highlight shared molecular pathways and key hub genes, including MAPT, SNCA, APP, and KLHL2, which may serve as potential therapeutic targets for both diseases. These findings contribute to a better understanding of the common molecular landscape in neurodegenerative diseases and open avenues for novel treatment strategies.

Authors

Publication Details

Published
2024-09-23
DOI
https://doi.org/10.53555/tyew3j54
Primary Topic
Bioinformatics and Genomic Networks
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

IDENTIFICATION OF COMMON DIFFERENTIALLY EXPRESSED GENES (DEGS) AND HUB GENES IN NEURODEGENERATIVE DISEASES: A COMPARATIVE STUDY OF ALZHEIMER'S AND PARKINSON'S USING EXTENSIVE DATA MINING

Muhammad Afzal
2 links
Bioinformatics and Genomic Networks
article

IDENTIFICATION OF COMMON DIFFERENTIALLY EXPRESSED GENES (DEGS) AND HUB GENES IN NEURODEGENERATIVE DISEASES: A COMPARATIVE STUDY OF ALZHEIMER'S AND PARKINSON'S USING EXTENSIVE DATA MINING

Muhammad Afzal
article en

Abstract

Alzheimer's disease (AD) and Parkinson's disease (PD) are the two most prevalent neurodegenerative disorders, sharing overlapping pathophysiological mechanisms. This study aims to identify common differentially expressed genes (DEGs) and hub genes between AD and PD using publicly available datasets from the Gene Expression Omnibus (GEO). We utilized datasets GSE5281 for AD and GSE49036 for PD to conduct a comparative analysis. After normalization and differential expression analysis, common DEGs were identified, followed by protein-protein interaction (PPI) network construction using the STRING database. Hub genes were extracted through Cytoscape's cytoHubba plugin based on centrality measures. The results highlight shared molecular pathways and key hub genes, including MAPT, SNCA, APP, and KLHL2, which may serve as potential therapeutic targets for both diseases. These findings contribute to a better understanding of the common molecular landscape in neurodegenerative diseases and open avenues for novel treatment strategies.

Openalex Percentile: Top 86%
Bioinformatics and Genomic Networks
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.