Unraveling the threshold and interaction effects of environmental variables on soil organic carbon mapping in plateau watershed

• Landscape metrics were used as environmental variables to estimate and map SOC. • Environmental variables have threshold and interaction effects in SOC mapping. • The two effects were investigated with combined GBDT and partial dependence analysis. • Soil moisture is the most important factor that affects the spatial variation of SOC. • High soil moisture and high landscape contagion favour SOC accumulation. Understanding the spatial distribution and mechanisms driving soil organic carbon (SOC) is crucial for assessing soil carbon stocks and implementing effective carbon sequestration strategies in agricultural landscapes. The linear and nonlinear relationships between environmental variables and SOC have been extensively documented, but the threshold and interaction effects among multiple covariates on SOC remain underexplored. This study focused on farmland within the Qilu Lake watershed in Yunnan Province, China, which is characterized by complex surface conditions shaped by both climate change and anthropogenic activities. Utilizing 216 soil samples from the watershed, this research aimed to investigate the threshold and interaction effects of environmental variables on SOC. To achieve this, gradient boosted decision tree (GBDT) combined with partial dependence analysis were employed to elucidate the spatial distribution of SOC and the intricate relationships between environmental factors and SOC. In order to enhance the accuracy of SOC prediction, we employed the landscape metrics as environmental variables, thereby facilitating a more comprehensive description of the landscape. The results indicated that GBDT (R 2 = 0.47) outperformed random forest (R 2 = 0.38), achieving higher accuracy and lower uncertainty, indicated by a narrower 90% prediction interval. The SOC distribution was predominantly influenced by soil moisture, elevation, and the contagion index (CONTAG), with threshold effects observed at relatively high soil moisture levels (>50%), CONTAG levels (>85%), and relatively low elevations (<1812 m). Moreover, the nonlinear relationship between one environmental variable and SOC could be influenced by another, suggesting interaction effects rather than a simple additive effect. Our findings suggest that combining GBDT modeling with partial dependence analysis provides an efficient and interpretable approach for SOC mapping. Knowledge of the threshold and interaction effects is critical for understanding the complex relationships between environmental variables and SOC, which has important implications for soil carbon management.

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Publication Details

Journal
Geoderma
Published
2024-09-23
DOI
https://doi.org/10.1016/j.geoderma.2024.117032
Citations
16
Primary Topic
Soil Geostatistics and Mapping
Type
article
Field-Weighted Citation Impact
3.29

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article

Unraveling the threshold and interaction effects of environmental variables on soil organic carbon mapping in plateau watershed

Yiyun Chen, Yujiao Wei, Yazhen Hu, Peiheng Yu et al.
16 citations
Geoderma
Soil Geostatistics and Mapping
3.29
article

Unraveling the threshold and interaction effects of environmental variables on soil organic carbon mapping in plateau watershed

Yiyun Chen, Yujiao Wei, Yazhen Hu, Peiheng Yu, Yongsheng Hong, Jiaxue Wang, Chengqi Zhang, Zhou Shi
article en
16 citations

Abstract

• Landscape metrics were used as environmental variables to estimate and map SOC. • Environmental variables have threshold and interaction effects in SOC mapping. • The two effects were investigated with combined GBDT and partial dependence analysis. • Soil moisture is the most important factor that affects the spatial variation of SOC. • High soil moisture and high landscape contagion favour SOC accumulation. Understanding the spatial distribution and mechanisms driving soil organic carbon (SOC) is crucial for assessing soil carbon stocks and implementing effective carbon sequestration strategies in agricultural landscapes. The linear and nonlinear relationships between environmental variables and SOC have been extensively documented, but the threshold and interaction effects among multiple covariates on SOC remain underexplored. This study focused on farmland within the Qilu Lake watershed in Yunnan Province, China, which is characterized by complex surface conditions shaped by both climate change and anthropogenic activities. Utilizing 216 soil samples from the watershed, this research aimed to investigate the threshold and interaction effects of environmental variables on SOC. To achieve this, gradient boosted decision tree (GBDT) combined with partial dependence analysis were employed to elucidate the spatial distribution of SOC and the intricate relationships between environmental factors and SOC. In order to enhance the accuracy of SOC prediction, we employed the landscape metrics as environmental variables, thereby facilitating a more comprehensive description of the landscape. The results indicated that GBDT (R 2 = 0.47) outperformed random forest (R 2 = 0.38), achieving higher accuracy and lower uncertainty, indicated by a narrower 90% prediction interval. The SOC distribution was predominantly influenced by soil moisture, elevation, and the contagion index (CONTAG), with threshold effects observed at relatively high soil moisture levels (>50%), CONTAG levels (>85%), and relatively low elevations (<1812 m). Moreover, the nonlinear relationship between one environmental variable and SOC could be influenced by another, suggesting interaction effects rather than a simple additive effect. Our findings suggest that combining GBDT modeling with partial dependence analysis provides an efficient and interpretable approach for SOC mapping. Knowledge of the threshold and interaction effects is critical for understanding the complex relationships between environmental variables and SOC, which has important implications for soil carbon management.

GeodermaVol. 450
Hong Kong Polytechnic University (HK), National University of Singapore (SG), Chinese Academy of Sciences (CN), Ministry of Natural Resources (CN), Wuhan University (CN), Guangzhou Urban Planning Survey & Design Institute (CN), University of Chinese Academy of Sciences (CN), Institute of Soil Science (CN), Zhejiang University (CN)
National Natural Science Foundation of China, State Key Laboratory of Information Engineering in Surveying, Mapping and Remote Sensing, National Key Research and Development Program of China
Life in Land
Openalex Percentile: Top 7%
Soil Geostatistics and Mapping
3.29
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