A PNP ion channel deep learning solver with local neural network and finite element input data

Abstract This paper presents a deep learning method for solving an improved one-dimensional Poisson–Nernst–Planck ion channel (PNPic) model, called the PNPic deep learning solver. The solver combines a novel local neural network, adapted from the neural network with local converging inputs, with an efficient PNPic finite element solver, developed in this work. In particular, the local neural network is extended to handle the complexities of the PNPic model—a system of nonlinear convection–diffusion and elliptic equations with multiple subdomains connected by interface conditions. The PNPic finite element solver efficiently generates input and reference datasets for fast training the local neural network, as well as input datasets for quickly predicting PNPic solutions with high accuracy for a family of PNPic models. Initial numerical tests, involving perturbations of model parameters and interface locations, demonstrate that the PNPic deep learning solver can generate highly accurate numerical solutions.

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Publication Details

Journal
Machine Learning Science and Technology
Published
2024-09-23
DOI
https://doi.org/10.1088/2632-2153/ad7e7a
Primary Topic
Non-Destructive Testing Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

A PNP ion channel deep learning solver with local neural network and finite element input data

Hwi Lee, Dexuan Xie, Harris Cobb, Zhen Chao et al.
Machine Learning Science and Technology
Non-Destructive Testing Techniques
article

A PNP ion channel deep learning solver with local neural network and finite element input data

Hwi Lee, Dexuan Xie, Harris Cobb, Zhen Chao, Yingjie Liu
article en

Abstract

Abstract This paper presents a deep learning method for solving an improved one-dimensional Poisson–Nernst–Planck ion channel (PNPic) model, called the PNPic deep learning solver. The solver combines a novel local neural network, adapted from the neural network with local converging inputs, with an efficient PNPic finite element solver, developed in this work. In particular, the local neural network is extended to handle the complexities of the PNPic model—a system of nonlinear convection–diffusion and elliptic equations with multiple subdomains connected by interface conditions. The PNPic finite element solver efficiently generates input and reference datasets for fast training the local neural network, as well as input datasets for quickly predicting PNPic solutions with high accuracy for a family of PNPic models. Initial numerical tests, involving perturbations of model parameters and interface locations, demonstrate that the PNPic deep learning solver can generate highly accurate numerical solutions.

Machine Learning Science and TechnologyVol. 5(4)
Georgia Institute of Technology (US), New York Institute of Technology (US), University of Wisconsin–Milwaukee (US), Western Washington University (US)
National Science Foundation, Simons Foundation
Openalex Percentile: Top 85%
Non-Destructive Testing Techniques
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