CDK5 affects the resistance of lung cancer to radiotherapy by altering the tumor microenvironment

This article aims to explore the impact of cyclin-dependent kinase 5 (CDK5) on the tumor microenvironment and its influence on radiotherapy resistance in lung cancer through bioinformatics analysis. Initially, dataset GSE148532 identifying 517 differentially expressed genes, with 67 downregulated and 450 upregulated. Functional enrichment analysis revealed these genes are primarily concentrated in the extracellular matrix. KEGG analysis indicated significant enrichment in the TGF-beta signaling pathway and cytokine-cytokine receptor interactions. Using Cytoscape, three key networks and the top ten intermediary genes were identified. Immune infiltration analysis showed significant correlations between CDK5 expression and macrophages, neutrophils, and dendritic cells.

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Journal
Journal of Radiation Research and Applied Sciences
Published
2024-09-23
DOI
https://doi.org/10.1016/j.jrras.2024.101104
Primary Topic
Cancer Cells and Metastasis
Type
article
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article

CDK5 affects the resistance of lung cancer to radiotherapy by altering the tumor microenvironment

You‐cai Zhu, Huafei Chen, Xiaofeng Li, Chun-Wei Xu et al.
Journal of Radiation Research and Applied Sciences
Cancer Cells and Metastasis
article

CDK5 affects the resistance of lung cancer to radiotherapy by altering the tumor microenvironment

You‐cai Zhu, Huafei Chen, Xiaofeng Li, Chun-Wei Xu, Kai-qi Du, Gang Lan, Z. Zhai, Li-Chao Huang, Puen Chen, Wen-Xian Wang
article en

Abstract

This article aims to explore the impact of cyclin-dependent kinase 5 (CDK5) on the tumor microenvironment and its influence on radiotherapy resistance in lung cancer through bioinformatics analysis. Initially, dataset GSE148532 identifying 517 differentially expressed genes, with 67 downregulated and 450 upregulated. Functional enrichment analysis revealed these genes are primarily concentrated in the extracellular matrix. KEGG analysis indicated significant enrichment in the TGF-beta signaling pathway and cytokine-cytokine receptor interactions. Using Cytoscape, three key networks and the top ten intermediary genes were identified. Immune infiltration analysis showed significant correlations between CDK5 expression and macrophages, neutrophils, and dendritic cells.

Journal of Radiation Research and Applied SciencesVol. 17(4)
Nanjing General Hospital of Nanjing Military Command (CN), Cancer Hospital of Chinese Academy of Medical Sciences (CN), Nanjing University (CN)
Good health and well-being
Openalex Percentile: Top 73%
Cancer Cells and Metastasis
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CDK5 affects the resistance of lung cancer to radiotherapy by altering the tumor microenvironment — You‐cai Zhu, Huafei Chen, et al. · Journal of Radiation Research and Applied Sciences (2024) | TGRS Research Map | TGRS