DIG-Mol: A Contrastive Dual-Interaction Graph Neural Network for Molecular Property Prediction

Molecular property prediction is a key component of AI-driven drug discovery and molecular characterization learning. Despite recent advances, existing methods still face challenges such as limited ability to generalize, and inadequate representation of learning from unlabeled data, especially for tasks specific to molecular structures. To address these limitations, we introduce DIG-Mol, a novel self-supervised graph neural network framework for molecular property prediction. This architecture leverages the power of contrast learning with dual interaction mechanisms and unique molecular graph enhancement strategies. DIG-Mol integrates a momentum distillation network with two interconnected networks to efficiently improve molecular characterization. The framework's ability to extract key information about molecular structure and higher-order semantics is supported by minimizing loss of contrast. We have established DIG-Mol's state-of-the-art performance through extensive experimental evaluation in a variety of molecular property prediction tasks. In addition to demonstrating superior transferability in a small number of learning scenarios, our visualizations highlight DIG-Mol's enhanced interpretability and representation capabilities. These findings confirm the effectiveness of our approach in overcoming challenges faced by traditional methods and mark a significant advance in molecular property prediction.

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Publication Details

Journal
IEEE Journal of Biomedical and Health Informatics
Published
2024-09-20
DOI
https://doi.org/10.1109/jbhi.2024.3464674
Citations
8
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
2.89

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article

DIG-Mol: A Contrastive Dual-Interaction Graph Neural Network for Molecular Property Prediction

Xiaopeng Wu, Guangsi Shi, Xiaojun Gao, Fuyi Li et al.
8 citations
IEEE Journal of Biomedical and Health Informatics
Computational Drug Discovery Methods
2.89
article

DIG-Mol: A Contrastive Dual-Interaction Graph Neural Network for Molecular Property Prediction

Xiaopeng Wu, Guangsi Shi, Xiaojun Gao, Fuyi Li, Zexing Zhao, Ruohua Ren
article en
8 citations

Abstract

Molecular property prediction is a key component of AI-driven drug discovery and molecular characterization learning. Despite recent advances, existing methods still face challenges such as limited ability to generalize, and inadequate representation of learning from unlabeled data, especially for tasks specific to molecular structures. To address these limitations, we introduce DIG-Mol, a novel self-supervised graph neural network framework for molecular property prediction. This architecture leverages the power of contrast learning with dual interaction mechanisms and unique molecular graph enhancement strategies. DIG-Mol integrates a momentum distillation network with two interconnected networks to efficiently improve molecular characterization. The framework's ability to extract key information about molecular structure and higher-order semantics is supported by minimizing loss of contrast. We have established DIG-Mol's state-of-the-art performance through extensive experimental evaluation in a variety of molecular property prediction tasks. In addition to demonstrating superior transferability in a small number of learning scenarios, our visualizations highlight DIG-Mol's enhanced interpretability and representation capabilities. These findings confirm the effectiveness of our approach in overcoming challenges faced by traditional methods and mark a significant advance in molecular property prediction.

IEEE Journal of Biomedical and Health InformaticsVol. 29(3)
Monash University (AU), Northwest A&F University (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 8%
Computational Drug Discovery Methods
2.89
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DIG-Mol: A Contrastive Dual-Interaction Graph Neural Network for Molecular Property Prediction — Xiaopeng Wu, Guangsi Shi, et al. · IEEE Journal of Biomedical and Health Informatics (2024) | TGRS Research Map | TGRS