Evaluation of Machine Learning Based QSAR Models for the Classification of Lung Surfactant Inhibitors

Inhaled chemicals can cause dysfunction in the lung surfactant, a protein-lipid complex with critical biophysical and biochemical functions. This inhibition has many structure-related and dose-dependent mechanisms, making hazard identification challenging. We developed quantitative structure-activity relationships for predicting lung surfactant inhibition using machine learning. Logistic regression, support vector machines, random forest, gradient-boosted trees, prior-data-fitted networks, and multilayer perceptron were evaluated as methods. Multilayer perceptron had the strongest performance with 96% accuracy and an F1 score of 0.97. Support vector machines and logistic regression also performed well with lower computation costs. This serves as a proof-of-concept for efficient hazard screening in the emerging area of lung surfactant inhibition.

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Publication Details

Journal
Environment & Health
Published
2024-09-20
DOI
https://doi.org/10.1021/envhealth.4c00118
Citations
3
Primary Topic
Inhalation and Respiratory Drug Delivery
Type
article
Field-Weighted Citation Impact
1.26

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article

Evaluation of Machine Learning Based QSAR Models for the Classification of Lung Surfactant Inhibitors

Joshua Peeples, James Y. Liu, Christie M. Sayes
3 citations
Environment & Health
Inhalation and Respiratory Drug Delivery
1.26
article

Evaluation of Machine Learning Based QSAR Models for the Classification of Lung Surfactant Inhibitors

Joshua Peeples, James Y. Liu, Christie M. Sayes
article en
3 citations

Abstract

Inhaled chemicals can cause dysfunction in the lung surfactant, a protein-lipid complex with critical biophysical and biochemical functions. This inhibition has many structure-related and dose-dependent mechanisms, making hazard identification challenging. We developed quantitative structure-activity relationships for predicting lung surfactant inhibition using machine learning. Logistic regression, support vector machines, random forest, gradient-boosted trees, prior-data-fitted networks, and multilayer perceptron were evaluated as methods. Multilayer perceptron had the strongest performance with 96% accuracy and an F1 score of 0.97. Support vector machines and logistic regression also performed well with lower computation costs. This serves as a proof-of-concept for efficient hazard screening in the emerging area of lung surfactant inhibition.

Environment & HealthVol. 2(12)
Baylor University (US), Texas A&M University (US)
Oak Ridge Institute for Science and Education, Air Force Research Laboratory
Openalex Percentile: Top 19%
Inhalation and Respiratory Drug Delivery
1.26
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Evaluation of Machine Learning Based QSAR Models for the Classification of Lung Surfactant Inhibitors — Joshua Peeples, James Y. Liu, et al. · Environment & Health (2024) | TGRS Research Map | TGRS