A chromosome-level genome assembly of the legume pod borer, Maruca vitrata Fabricius (Lepidoptera: Crambidae)
Maruca vitrata, a significant pest of legumes, impacts food security in Asia and Africa. This study presents a high-quality genome assembly of M. vitrata, utilizing advanced sequencing technologies including Nanopore long-read, MGI short-read, and Hi-C. The genome, totaling 482.3 Mb with a contig N50 of 2.91 Mb, features 41.58% repetitive sequences and encompasses 13,320 protein-coding genes. We performed comparative genomic analyses to affirm the accuracy and completeness of the protein sequences assembled, ensuring the assembly's integrity. Additionally, the annotation of 83 Cytochrome P450 (CYP) genes further confirms the comprehensive nature of the genome assembly and its annotations. This genome assembly not only deepens our understanding of M. vitrata biology but also supports the development of sustainable pest management strategies. This research highlights the importance of genomics in advancing sustainable agricultural solutions through innovative pest management approaches.
Authors
- Congling Huang
- Xuemei Tang (ORCID: https://orcid.org/0000-0003-0957-6420)
- Shuai Liu (ORCID: https://orcid.org/0000-0003-2244-2216)
- Kai Wan
- Jiale Wang (ORCID: https://orcid.org/0009-0007-0367-0631)
Institutions
- Key Laboratory of Guangdong Province (CN)
- Guangdong Academy of Agricultural Sciences (CN)
- Ministry of Agriculture (ID)
- Ministry of Agriculture and Rural Affairs (CN)
Publication Details
- Journal
- Scientific Data
- Published
- 2024-09-18
- DOI
- https://doi.org/10.1038/s41597-024-03854-4
- Citations
- 1
- Primary Topic
- Agricultural pest management studies
- Type
- article
- Field-Weighted Citation Impact
- 0.60
Funders
- National Natural Science Foundation of China
- Guangdong Academy of Agricultural Sciences
- Basic and Applied Basic Research Foundation of Guangdong Province