Identification and validation of hub differential genes in pulmonary sarcoidosis
A total of 138 cDEGs were screened from mediastinal lymph nodes and peripheral whole blood. Among them, 6 hub cDEGs including CTSS, CYBB, FPR2, MNDA, TLR1 and TLR8 with elevated degree and betweenness levels were illustrated in protein-protein interaction network. In comparison to healthy controls, CTSS (1.61 vs. 1.05), CYBB (1.68 vs. 1.07), FPR2 (2.77 vs. 0.96), MNDA (2.14 vs. 1.23), TLR1 (1.56 vs. 1.09), and TLR8 (2.14 vs. 0.98) displayed notably elevated expression levels within pulmonary sarcoidosis PBMC samples (P < 0.0001 for FPR2 and P < 0.05 for others), echoing with prior mRNA microarray findings. The most significant functional pathways were immune response, inflammatory response, plasma membrane and extracellular exosome, with 6 hub cDEGs distributing along these pathways. CTSS, CYBB, FPR2, MNDA, TLR1, and TLR8 could be conducive to improving the diagnostic process and understanding the underlying mechanisms of pulmonary sarcoidosis.
Authors
- Ying Zhou (ORCID: https://orcid.org/0000-0002-0295-8736)
- Xianqiu Chen (ORCID: https://orcid.org/0000-0002-1234-1027)
- Keting Min
- Qian Yao (ORCID: https://orcid.org/0009-0004-7394-8625)
- Mengmeng Zhao (ORCID: https://orcid.org/0000-0002-9682-6450)
- Dong Weng
Institutions
- Tongji University (CN)
- Shanghai Pulmonary Hospital (CN)
Publication Details
- Journal
- Frontiers in Immunology
- Published
- 2024-09-19
- DOI
- https://doi.org/10.3389/fimmu.2024.1466029
- Citations
- 2
- Primary Topic
- Sarcoidosis and Beryllium Toxicity Research
- Type
- article
- Field-Weighted Citation Impact
- 0.65
Funders
- Natural Science Foundation of Shanghai
- National Natural Science Foundation of China
- Science and Technology Commission of Shanghai Municipality
- Fundamental Research Funds for the Central Universities