Bacterial killing and the dimensions of bacterial death

Bacteria can be dead, alive, or exhibit slowed or suspended life forms, making bacterial death difficult to establish. Here, agar-plating, microscopic-counting, SYTO9/propidium-iodide staining, MTT-conversion, and bioluminescence-imaging were used to determine bacterial death upon exposure to different conditions. Rank correlations between pairs of assay outcomes were low, indicating different assays measure different aspects of bacterial death. Principal-component analysis yielded two principal components, named "reproductive-ability" (PC1) and "metabolic-activity" (PC2). Plotting of these principal components in two-dimensional space revealed a dead region, with borders defined by the PC1 and PC2 values. Sensu stricto implies an unpractical reality that all assays determining PC1 and PC2 must be carried out in order to establish bacterial death. Considering this unpracticality, it is suggested that at least one assay determining reproductive activity (PC1) and one assay determining metabolic activity (PC2) should be used to establish bacterial death. Minimally, researchers should specifically describe which dimension of bacterial death is assessed, when addressing bacterial death.

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Publication Details

Journal
npj Biofilms and Microbiomes
Published
2024-09-17
DOI
https://doi.org/10.1038/s41522-024-00559-9
Citations
12
Primary Topic
Vibrio bacteria research studies
Type
article
Field-Weighted Citation Impact
6.79

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article

Bacterial killing and the dimensions of bacterial death

Yijin Ren, Emma S C Dijkstra, Jelmer Sjollema, Henny C. van der Mei et al.
12 citations
npj Biofilms and Microbiomes
Vibrio bacteria research studies
6.79
article

Bacterial killing and the dimensions of bacterial death

Yijin Ren, Emma S C Dijkstra, Jelmer Sjollema, Henny C. van der Mei, Jiuyi Li, Gésinda I. Geertsema-Doornbusch, Zexin Zhang, Jian Liu, Renfei Wu, H Willy de Haan-Visser, Cong Li, Henk J. Busscher, Hans C Flemming
article en
12 citations

Abstract

Bacteria can be dead, alive, or exhibit slowed or suspended life forms, making bacterial death difficult to establish. Here, agar-plating, microscopic-counting, SYTO9/propidium-iodide staining, MTT-conversion, and bioluminescence-imaging were used to determine bacterial death upon exposure to different conditions. Rank correlations between pairs of assay outcomes were low, indicating different assays measure different aspects of bacterial death. Principal-component analysis yielded two principal components, named "reproductive-ability" (PC1) and "metabolic-activity" (PC2). Plotting of these principal components in two-dimensional space revealed a dead region, with borders defined by the PC1 and PC2 values. Sensu stricto implies an unpractical reality that all assays determining PC1 and PC2 must be carried out in order to establish bacterial death. Considering this unpracticality, it is suggested that at least one assay determining reproductive activity (PC1) and one assay determining metabolic activity (PC2) should be used to establish bacterial death. Minimally, researchers should specifically describe which dimension of bacterial death is assessed, when addressing bacterial death.

npj Biofilms and MicrobiomesVol. 10(1)
University Medical Center Groningen (NL), University of Groningen (NL), Beijing Jiaotong University (CN), Soochow University (CN), Institute of Oceanology (CN), University of Duisburg-Essen (DE)
Universitair Medisch Centrum Groningen
Openalex Percentile: Top 3%
Vibrio bacteria research studies
6.79
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