An influence of electronic structure theory method, thermodynamic and implicit solvation corrections on the organic carbonates conformational and binding energies

An impact of an electronic structure or force field method, gas-phase thermodynamic correction, and continuum solvation model on organic carbonate clusters (S)<sub>n</sub> conformational and binding energies is explored. None of the tested force field (GFN-FF, GAFF, MMFF94) and standard semiempirical methods (PM3, AM1, RM1, PM6, PM6-D3, PM6-D3H4, PM7) can reproduce reference RI-SCS-MP2 conformational energies. Tight-binding GFNn-xTB methods provide more realistic conformational energies which are accurate enough to discard the least stable conformers. The effect of thermodynamic correction is moderate and can be ignored if the gas phase conformational stability ranking is a goal. The influence of continuum solvation is stronger, especially if reinforced with the Gibbs free energy thermodynamic correction, and results in the reduced spread of conformational energies. The cluster formation binding energies strongly depend on a particular approach to vibrational thermochemistry with the difference between traditional harmonic and modified scaled rigid - harmonic oscillator approximations reaching 10 kcal mol<sup>-1</sup>.

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Publication Details

Journal
Journal of Computational Chemistry
Published
2024-09-17
DOI
https://doi.org/10.1002/jcc.27471
Citations
3
Primary Topic
Free Radicals and Antioxidants
Type
article
Field-Weighted Citation Impact
0.75

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article

An influence of electronic structure theory method, thermodynamic and implicit solvation corrections on the organic carbonates conformational and binding energies

Arseniy A. Otlyotov, Yury V. Minenkov, Alexander S. Ryzhako, Anna A. Tuma
3 citations
Journal of Computational Chemistry
Free Radicals and Antioxidants
0.75
article

An influence of electronic structure theory method, thermodynamic and implicit solvation corrections on the organic carbonates conformational and binding energies

Arseniy A. Otlyotov, Yury V. Minenkov, Alexander S. Ryzhako, Anna A. Tuma
article en
3 citations

Abstract

An impact of an electronic structure or force field method, gas-phase thermodynamic correction, and continuum solvation model on organic carbonate clusters (S)<sub>n</sub> conformational and binding energies is explored. None of the tested force field (GFN-FF, GAFF, MMFF94) and standard semiempirical methods (PM3, AM1, RM1, PM6, PM6-D3, PM6-D3H4, PM7) can reproduce reference RI-SCS-MP2 conformational energies. Tight-binding GFNn-xTB methods provide more realistic conformational energies which are accurate enough to discard the least stable conformers. The effect of thermodynamic correction is moderate and can be ignored if the gas phase conformational stability ranking is a goal. The influence of continuum solvation is stronger, especially if reinforced with the Gibbs free energy thermodynamic correction, and results in the reduced spread of conformational energies. The cluster formation binding energies strongly depend on a particular approach to vibrational thermochemistry with the difference between traditional harmonic and modified scaled rigid - harmonic oscillator approximations reaching 10 kcal mol<sup>-1</sup>.

Journal of Computational ChemistryVol. 45(32)
D. Mendeleyev University of Chemical Technology of Russia (RU), Lomonosov Moscow State University (RU), Semenov Institute of Chemical Physics (RU)
Russian Science Foundation
Openalex Percentile: Top 32%
Free Radicals and Antioxidants
0.75
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An influence of electronic structure theory method, thermodynamic and implicit solvation corrections on the organic carbonates conformational and binding energies — Arseniy A. Otlyotov, Yury V. Minenkov, et al. · Journal of Computational Chemistry (2024) | TGRS Research Map | TGRS