A protocol for the detection of precision genome editing in human cells using One-pot DTECT

Prime editing is a highly versatile CRISPR-based genome editing technology that allows for the precise installation of desired genetic variants. This protocol describes how to use One-pot DTECT to assess prime editing efficiency in human cells. Key steps include conducting prime editing, extracting genomic DNA, performing AcuI-tagging PCR, capturing genetic signatures, and detecting captured signatures through qualitative, quantitative, and visual methods. One-pot DTECT enables same-day detection of targeted genetic signatures introduced by precision genome editing technologies using off-the-shelf reagents. For complete details on the use and execution of this protocol, please refer to Baudrier et al.<sup>1</sup>.

Authors

Institutions

Publication Details

Journal
STAR Protocols
Published
2024-09-01
DOI
https://doi.org/10.1016/j.xpro.2024.103307
Primary Topic
CRISPR and Genetic Engineering
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A protocol for the detection of precision genome editing in human cells using One-pot DTECT

Jethro Langley, Lou Baudrier, Pierre Billon
STAR Protocols
CRISPR and Genetic Engineering
article

A protocol for the detection of precision genome editing in human cells using One-pot DTECT

Jethro Langley, Lou Baudrier, Pierre Billon
article en

Abstract

Prime editing is a highly versatile CRISPR-based genome editing technology that allows for the precise installation of desired genetic variants. This protocol describes how to use One-pot DTECT to assess prime editing efficiency in human cells. Key steps include conducting prime editing, extracting genomic DNA, performing AcuI-tagging PCR, capturing genetic signatures, and detecting captured signatures through qualitative, quantitative, and visual methods. One-pot DTECT enables same-day detection of targeted genetic signatures introduced by precision genome editing technologies using off-the-shelf reagents. For complete details on the use and execution of this protocol, please refer to Baudrier et al.<sup>1</sup>.

STAR ProtocolsVol. 5(3)
University of Calgary (CA)
Calgary Foundation, Cumming School of Medicine, University of Calgary, Canadian Institutes of Health Research, Natural Sciences and Engineering Research Council of Canada
Zero hunger
Openalex Percentile: Top 86%
CRISPR and Genetic Engineering
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.