A protocol for the detection of precision genome editing in human cells using One-pot DTECT
Prime editing is a highly versatile CRISPR-based genome editing technology that allows for the precise installation of desired genetic variants. This protocol describes how to use One-pot DTECT to assess prime editing efficiency in human cells. Key steps include conducting prime editing, extracting genomic DNA, performing AcuI-tagging PCR, capturing genetic signatures, and detecting captured signatures through qualitative, quantitative, and visual methods. One-pot DTECT enables same-day detection of targeted genetic signatures introduced by precision genome editing technologies using off-the-shelf reagents. For complete details on the use and execution of this protocol, please refer to Baudrier et al.<sup>1</sup>.
Authors
- Jethro Langley (ORCID: https://orcid.org/0000-0002-7644-4631)
- Lou Baudrier
- Pierre Billon
Institutions
- University of Calgary (CA)
Publication Details
- Journal
- STAR Protocols
- Published
- 2024-09-01
- DOI
- https://doi.org/10.1016/j.xpro.2024.103307
- Primary Topic
- CRISPR and Genetic Engineering
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Calgary Foundation
- Cumming School of Medicine, University of Calgary
- Canadian Institutes of Health Research
- Natural Sciences and Engineering Research Council of Canada