Cryo‐ <scp>EM</scp> and solid state <scp>NMR</scp> together provide a more comprehensive structural investigation of protein fibrils

The tropomyosin 1 isoform I/C C-terminal domain (Tm1-LC) fibril structure is studied jointly with cryogenic electron microscopy (cryo-EM) and solid state nuclear magnetic resonance (NMR). This study demonstrates the complementary nature of these two structural biology techniques. Chemical shift assignments from solid state NMR are used to determine the secondary structure at the level of individual amino acids, which is faithfully seen in cryo-EM reconstructions. Additionally, solid state NMR demonstrates that the region not observed in the reconstructed cryo-EM density is primarily in a highly mobile random coil conformation rather than adopting multiple rigid conformations. Overall, this study illustrates the benefit of investigations combining cryo-EM and solid state NMR to investigate protein fibril structure.

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Publication Details

Journal
Protein Science
Published
2024-09-14
DOI
https://doi.org/10.1002/pro.5168
Citations
2
Primary Topic
Advanced NMR Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.48

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article

Cryo‐ EM and solid state NMR together provide a more comprehensive structural investigation of protein fibrils

Yang Li, Dylan T. Murray, Blake D. Fonda, Masato Kato
2 citations
Protein Science
Advanced NMR Techniques and Applications
0.48
article

Cryo‐ EM and solid state NMR together provide a more comprehensive structural investigation of protein fibrils

Yang Li, Dylan T. Murray, Blake D. Fonda, Masato Kato
article en
2 citations

Abstract

The tropomyosin 1 isoform I/C C-terminal domain (Tm1-LC) fibril structure is studied jointly with cryogenic electron microscopy (cryo-EM) and solid state nuclear magnetic resonance (NMR). This study demonstrates the complementary nature of these two structural biology techniques. Chemical shift assignments from solid state NMR are used to determine the secondary structure at the level of individual amino acids, which is faithfully seen in cryo-EM reconstructions. Additionally, solid state NMR demonstrates that the region not observed in the reconstructed cryo-EM density is primarily in a highly mobile random coil conformation rather than adopting multiple rigid conformations. Overall, this study illustrates the benefit of investigations combining cryo-EM and solid state NMR to investigate protein fibril structure.

Protein ScienceVol. 33(10)
University of Connecticut (US), University of California, Davis (US), The University of Texas Southwestern Medical Center (US)
National Science Foundation, Cancer Prevention and Research Institute of Texas, University of Texas Southwestern Medical Center, National Institutes of Health, University of California, Davis, National Institute of General Medical Sciences
Openalex Percentile: Top 40%
Advanced NMR Techniques and Applications
0.48
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