Single-cell profiling uncovers proliferative cells as key determinants of survival outcomes in lower-grade glioma patients

Lower-grade gliomas (LGGs), despite their generally indolent clinical course, are characterized by invasive growth patterns and genetic heterogeneity, which can lead to malignant transformation, underscoring the need for improved prognostic markers and therapeutic strategies. This study utilized single-cell RNA sequencing (scRNA-seq) and bulk RNA-seq to identify a novel cell type, referred to as "Prol," characterized by increased proliferation and linked to a poor prognosis in patients with LGG, particularly under the context of immunotherapy interventions. A signature, termed the Prol signature, was constructed based on marker genes specific to the Prol cell type, utilizing an artificial intelligence (AI) network that integrates traditional regression, machine learning, and deep learning algorithms. This signature demonstrated enhanced predictive accuracy for LGG prognosis compared to existing models and showed pan-cancer prognostic potential. The mRNA expression of the key gene PTTG1 from the Prol signature was further validated through quantitative reverse transcription polymerase chain reaction (qRT-PCR). Our findings not only provide novel insights into the molecular and cellular mechanisms of LGG but also offer a promising avenue for the development of targeted biomarkers and therapeutic interventions.

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Publication Details

Journal
Discover Oncology
Published
2024-09-14
DOI
https://doi.org/10.1007/s12672-024-01302-8
Primary Topic
Glioma Diagnosis and Treatment
Type
article
Field-Weighted Citation Impact
0.00
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article

Single-cell profiling uncovers proliferative cells as key determinants of survival outcomes in lower-grade glioma patients

Qing Hua Zhang, Meng Zhu, Jianming Peng, Xiaofeng Zhu et al.
Discover Oncology
Glioma Diagnosis and Treatment
article

Single-cell profiling uncovers proliferative cells as key determinants of survival outcomes in lower-grade glioma patients

Qing Hua Zhang, Meng Zhu, Jianming Peng, Xiaofeng Zhu, Yan Zhu
article en

Abstract

Lower-grade gliomas (LGGs), despite their generally indolent clinical course, are characterized by invasive growth patterns and genetic heterogeneity, which can lead to malignant transformation, underscoring the need for improved prognostic markers and therapeutic strategies. This study utilized single-cell RNA sequencing (scRNA-seq) and bulk RNA-seq to identify a novel cell type, referred to as "Prol," characterized by increased proliferation and linked to a poor prognosis in patients with LGG, particularly under the context of immunotherapy interventions. A signature, termed the Prol signature, was constructed based on marker genes specific to the Prol cell type, utilizing an artificial intelligence (AI) network that integrates traditional regression, machine learning, and deep learning algorithms. This signature demonstrated enhanced predictive accuracy for LGG prognosis compared to existing models and showed pan-cancer prognostic potential. The mRNA expression of the key gene PTTG1 from the Prol signature was further validated through quantitative reverse transcription polymerase chain reaction (qRT-PCR). Our findings not only provide novel insights into the molecular and cellular mechanisms of LGG but also offer a promising avenue for the development of targeted biomarkers and therapeutic interventions.

Discover OncologyVol. 15(1)
Yangzhou Polytechnic Institute (CN)
Zero hunger
Openalex Percentile: Top 75%
Glioma Diagnosis and Treatment
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Single-cell profiling uncovers proliferative cells as key determinants of survival outcomes in lower-grade glioma patients — Qing Hua Zhang, Meng Zhu, et al. · Discover Oncology (2024) | TGRS Research Map | TGRS