Evaluating the risk of data loss due to particle radiation damage in a DNA data storage system

DNA data storage is a potential alternative to magnetic tape for archival storage purposes, promising substantial gains in information density. Critical to the success of DNA as a storage media is an understanding of the role of environmental factors on the longevity of the stored information. In this paper, we evaluate the effect of exposure to ionizing particle radiation, a cause of data loss in traditional magnetic media, on the longevity of data in DNA data storage pools. We develop a mass action kinetics model to estimate the rate of damage accumulation in DNA strands due to neutron interactions with both nucleotides and residual water molecules, then utilize the model to evaluate the effect several design parameters of a typical DNA data storage scheme have on expected data longevity. Finally, we experimentally validate our model by exposing dried DNA samples to different levels of neutron irradiation and analyzing the resulting error profile. Our results show that particle radiation is not a significant contributor to data loss in DNA data storage pools under typical storage conditions.

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Publication Details

Journal
Nature Communications
Published
2024-09-14
DOI
https://doi.org/10.1038/s41467-024-51768-x
Citations
3
Primary Topic
DNA and Biological Computing
Type
article
Field-Weighted Citation Impact
0.70

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article

Evaluating the risk of data loss due to particle radiation damage in a DNA data storage system

Kumkum Ganguly, Carlo Cazzaniga, Bichlien H. Nguyen, Christopher N. Takahashi et al.
3 citations
Nature Communications
DNA and Biological Computing
0.70
article

Evaluating the risk of data loss due to particle radiation damage in a DNA data storage system

Kumkum Ganguly, Carlo Cazzaniga, Bichlien H. Nguyen, Christopher N. Takahashi, Jake A. Smith, Steve Wender, Sean Blanchard, Paolo Rech, David Ward, Christopher G. Frost
article en
3 citations

Abstract

DNA data storage is a potential alternative to magnetic tape for archival storage purposes, promising substantial gains in information density. Critical to the success of DNA as a storage media is an understanding of the role of environmental factors on the longevity of the stored information. In this paper, we evaluate the effect of exposure to ionizing particle radiation, a cause of data loss in traditional magnetic media, on the longevity of data in DNA data storage pools. We develop a mass action kinetics model to estimate the rate of damage accumulation in DNA strands due to neutron interactions with both nucleotides and residual water molecules, then utilize the model to evaluate the effect several design parameters of a typical DNA data storage scheme have on expected data longevity. Finally, we experimentally validate our model by exposing dried DNA samples to different levels of neutron irradiation and analyzing the resulting error profile. Our results show that particle radiation is not a significant contributor to data loss in DNA data storage pools under typical storage conditions.

Nature CommunicationsVol. 15(1)
Microsoft (United States) (US), Los Alamos National Laboratory (US), Science and Technology Facilities Council (GB), University of Trento (IT), University of Washington (US), Microsoft Research (United Kingdom) (GB)
Microsoft
Clean water and sanitation
Openalex Percentile: Top 30%
DNA and Biological Computing
0.70
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