Complete mitochondrial genome sequence of the white root rot pathogen <i>Dematophora necatrix</i> (Xylariaceae: Xylariales)

The mitochondrial genome of <i>Dematophora necatrix</i> is 121,350 base pairs in length with a G + C content of 30.19%. Phylogenetic analysis showed that <i>D. necatrix</i> grouped with other members of the Xylariaceae, with which its mitogenome also shares a broadly similar architecture and gene content. The <i>D. necatrix</i> mitogenome contains 14 protein-coding and 26 tRNA-encoding genes, as well as one copy each of the <i>rnl</i>, <i>rns</i>, <i>rps3</i> and <i>nat1</i> genes. However, as much as 80% of this genome is intronic or non-coding. This is likely due to expansions and rearrangements caused by the large number of group I introns and the homing endonucleases and reverse-transcriptases they encode. Our study thus provides a valuable foundation from which to explore the mitochondrion's role in the biology of <i>D. necatrix</i>, and also serves as a resource for investigating the pathogen's population biology and general ecology.

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Publication Details

Journal
Mitochondrial DNA Part B
Published
2024-09-01
DOI
https://doi.org/10.1080/23802359.2024.2403411
Citations
1
Primary Topic
Plant Pathogens and Fungal Diseases
Type
article
Field-Weighted Citation Impact
0.33

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article

Complete mitochondrial genome sequence of the white root rot pathogen Dematophora necatrix (Xylariaceae: Xylariales)

Noëlani van den Berg, Lieschen De Vos, Magriet A. van der Nest, Emma T. Steenkamp et al.
1 citations
Mitochondrial DNA Part B
Plant Pathogens and Fungal Diseases
0.33
article

Complete mitochondrial genome sequence of the white root rot pathogen Dematophora necatrix (Xylariaceae: Xylariales)

Noëlani van den Berg, Lieschen De Vos, Magriet A. van der Nest, Emma T. Steenkamp, Raven Wienk, Velushka Swart
article en
1 citations

Abstract

The mitochondrial genome of <i>Dematophora necatrix</i> is 121,350 base pairs in length with a G + C content of 30.19%. Phylogenetic analysis showed that <i>D. necatrix</i> grouped with other members of the Xylariaceae, with which its mitogenome also shares a broadly similar architecture and gene content. The <i>D. necatrix</i> mitogenome contains 14 protein-coding and 26 tRNA-encoding genes, as well as one copy each of the <i>rnl</i>, <i>rns</i>, <i>rps3</i> and <i>nat1</i> genes. However, as much as 80% of this genome is intronic or non-coding. This is likely due to expansions and rearrangements caused by the large number of group I introns and the homing endonucleases and reverse-transcriptases they encode. Our study thus provides a valuable foundation from which to explore the mitochondrion's role in the biology of <i>D. necatrix</i>, and also serves as a resource for investigating the pathogen's population biology and general ecology.

Mitochondrial DNA Part BVol. 9(9)
University of Pretoria (ZA)
Hans Merensky Foundation
Life in Land, Zero hunger
Openalex Percentile: Top 41%
Plant Pathogens and Fungal Diseases
0.33
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