Undulatory swimming in suspensions and networks of flexible filaments

Many biological fluids are composed of suspended polymers immersed in a viscous fluid. A prime example is mucus, where the polymers are also known to form a network. While the presence of this microstructure is linked with an overall non-Newtonian response of the fluid, swimming cells and microorganisms similar in size to the network pores and polymer filaments instead experience the heterogeneous nature of the environment, interacting directly with the polymers as obstacles as they swim. To characterise and understand locomotion in these heterogeneous environments, we simulate the motion of an undulatory swimmer through three-dimensional suspensions and networks of elastic filaments, exploring the effects of filament and link compliance and filament concentration up to 20 % volume fraction. For compliant environments, the swimming speed increases with filament concentration to values approximately 10 % higher than in a viscous fluid. In stiffer environments, a non-monotonic dependence is observed, with an initial increase in speed to values 5 % greater than in a viscous fluid, followed by a dramatic reduction to speeds just a fraction of its value in a viscous fluid. Velocity fluctuations are also more pronounced in stiffer environments. We demonstrate that speed enhancements are linked to hydrodynamic interactions with the microstructure, while reductions are due to the filaments restricting the amplitude of the swimmer's propulsive wave. Unlike previous studies where interactions with obstacles allowed for significant enhancements in swimming speeds, the modest enhancements seen here are more comparable to those given by models where the environment is treated as a continuous viscoelastic fluid.