Whole genome sequence data of a lignocellulose-degrading bacterium, Arthrobacter koreensis BSB isolated from the soils of Santiniketan, India
A draft genome sequence of an isolate of <i>Arthrobacter koreensis</i> BSB from Santiniketan soil is being published. A. koreensis BSB produces lignocellulases, which are crucial in plant biomass degradation. It is a potential source of enzymes of digestive importance, especially lignocellulases. Genomic DNA was isolated from a single bacterial colony using a QIAgen Blood and Tissue kit (QIAgen Inc., Canada). Illumina HiSeq X performed the DNA sequence, employing 2 × 150 paired-end chemistry, and 8,725,587 reads were obtained, corresponding to a sequence coverage of 755X. The draft genome assembly formed 15 contigs > 200 base pairs in length (N50 value= 446, 958 and L50= 3). The genome size is 3,466,004 base pairs with an average GC percentage of 65.94 %. Annotation and prediction of genes were carried out with Prokka v.1.14.6, and 3,172 CDS, 3236 genes, 58 tRNA genes, 4 rRNA genes, and 2 tmRNA genes were identified.
Authors
- Shibani Chaudhury (ORCID: https://orcid.org/0000-0001-7413-6320)
- Binoy Kumar Show (ORCID: https://orcid.org/0000-0002-6870-7155)
- Srinivasan Balachandran (ORCID: https://orcid.org/0000-0003-4247-408X)
- Raju Biswas (ORCID: https://orcid.org/0000-0002-6131-7015)
- Andrew B. Ross
Institutions
- Visva-Bharati University (IN)
- University of Leeds (GB)
Publication Details
- Journal
- Data in Brief
- Published
- 2024-09-12
- DOI
- https://doi.org/10.1016/j.dib.2024.110915
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Biotechnology and Biological Sciences Research Council