Transcriptome analysis identifies CCDC86 as a new potential Head and Neck Squamous Cell Carcinoma biomarker

OBJECTIVES: Overall, this comprehensive analysis aims to evaluate the expression profile of CCDC86 in Head and Neck Squamous Cell Carcinoma, providing insights into its potential as a diagnostic biomarker. METHODS: Initially, we conducted transcriptomic integration analysis to examine CCDC86 expression in HNSCC using various datasets (RNA-seq) obtained from the gene expression profiling interactive analysis database. We also established the diagnostic significance of CCDC86 and coregulated genes in HNSCC through the Kaplan–Meier Plotter. RESULTS: Initially, we detected elevated levels of CCDC86 in HNSCC, which correlated with lower survival rates (p=<0.001). We also identified seven genes coregulated with CCDC86 that were also overexpressed in HNSCC in comparison with normal tissues. CONCLUSIONS: For the first time, our findings suggest that CCDC86 can be a new emerging biomarker with promising therapeutic values to HNSCC patients. IMPLICATIONS: No further implications other than specified in conclusion.

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Publication Details

Journal
Dentistry Review
Published
2024-09-01
DOI
https://doi.org/10.1016/j.dentre.2024.100105
Primary Topic
RNA modifications and cancer
Type
article
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0.00
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article

Transcriptome analysis identifies CCDC86 as a new potential Head and Neck Squamous Cell Carcinoma biomarker

Pablo Shimaoka Chagas, Bidhan Bhandari, Évila Lopes Salles, Daniel Lee et al.
Dentistry Review
RNA modifications and cancer
article

Transcriptome analysis identifies CCDC86 as a new potential Head and Neck Squamous Cell Carcinoma biomarker

Pablo Shimaoka Chagas, Bidhan Bhandari, Évila Lopes Salles, Daniel Lee, Sahar Emami Naeini, Babak Baban, Jules Gouron, Henrique Shimaoka Chagas
article en

Abstract

OBJECTIVES: Overall, this comprehensive analysis aims to evaluate the expression profile of CCDC86 in Head and Neck Squamous Cell Carcinoma, providing insights into its potential as a diagnostic biomarker. METHODS: Initially, we conducted transcriptomic integration analysis to examine CCDC86 expression in HNSCC using various datasets (RNA-seq) obtained from the gene expression profiling interactive analysis database. We also established the diagnostic significance of CCDC86 and coregulated genes in HNSCC through the Kaplan–Meier Plotter. RESULTS: Initially, we detected elevated levels of CCDC86 in HNSCC, which correlated with lower survival rates (p=<0.001). We also identified seven genes coregulated with CCDC86 that were also overexpressed in HNSCC in comparison with normal tissues. CONCLUSIONS: For the first time, our findings suggest that CCDC86 can be a new emerging biomarker with promising therapeutic values to HNSCC patients. IMPLICATIONS: No further implications other than specified in conclusion.

Dentistry ReviewVol. 4(3)
Good health and well-being
Openalex Percentile: Top 86%
RNA modifications and cancer
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