HiCMC: High-Efficiency Contact Matrix Compressor
HiCMC is a novel compression approach that utilizes intrinsic properties of contact matrix, such as compartments and domains. It allows for a better compression in comparison to the state-of-the-art methods. HiCMC is available at https://github.com/sXperfect/hicmc .
Authors
- Jan Voges (ORCID: https://orcid.org/0000-0002-6080-660X)
- Fabian Müntefering (ORCID: https://orcid.org/0000-0002-4174-9662)
- Jörn Östermann (ORCID: https://orcid.org/0000-0002-6743-3324)
- Yeremia Gunawan Adhisantoso (ORCID: https://orcid.org/0000-0001-8132-5007)
- Tim Körner
Institutions
- Leibniz University Hannover (DE)
- Institut für Informationsverarbeitung (DE)
- Navarre Institute of Health Research (ES)
- L3S Research Center (DE)
- Universidad de Navarra (ES)
Publication Details
- Journal
- BMC Bioinformatics
- Published
- 2024-09-10
- DOI
- https://doi.org/10.1186/s12859-024-05907-2
- Primary Topic
- Genomics and Chromatin Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Australian Government
- Bundesministerium für Bildung und Forschung
- Gottfried Wilhelm Leibniz Universität Hannover