Draft genome sequence data of Pythium cedri Chen 4, the causal pathogen of deodar cedar root rot
<i>Pythium</i> species are distributed globally, with certain members playing significant roles as plant and animal pathogens. <i>Pythium cedri</i> Chen 4 has been identified as a pathogenic isolate responsible for causing root rot on <i>Cedrus deodara</i>. Here, a comprehensive genome-wide sequence of <i>P. cedri</i> strain Chen 4 utilizing the Illumina NovaSeq sequencing platform and a Pacific Biosciences Sequel sequencing platform is presented. The genome of <i>P. cedri</i> strain Chen 4 was assembled into 150 contigs containing a combined size of 41.25 Mb, N50 value of 1,717,859 bp and N90 value of 431,829 bp. Genome annotation revealed 14,077 protein-encoding genes and 364 of the 1016 predicted proteins were putative effectors. The present work enriches the genetic resources of <i>P. cedri</i> for studying its evolution and can contribute to a better understanding of <i>P. cedri</i>-host interaction.
Authors
- Yusufjon Gafforov (ORCID: https://orcid.org/0000-0003-3076-4709)
- Yuanyuan Chen (ORCID: https://orcid.org/0000-0002-3114-9583)
- Jiajia Chen (ORCID: https://orcid.org/0000-0003-0856-2457)
- Hongjun Yang
- Yifan Xing
- Jin-Feng Peng
- Jian Yu
Institutions
- Academy of Sciences Republic of Uzbekistan (UZ)
- New Uzbekistan University (UZ)
- National University of Uzbekistan (UZ)
- Henan Agricultural University (CN)
Publication Details
- Journal
- Data in Brief
- Published
- 2024-09-10
- DOI
- https://doi.org/10.1016/j.dib.2024.110930
- Primary Topic
- Plant Pathogens and Resistance
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China