A Statistical Methodology for Evaluating Asymmetry after Normalization with Application to Genomic Data

This study evaluates the symmetry of data distributions after normalization, focusing on various statistical tests, including a few explored test named Rp. We apply normalization techniques, such as variance stabilizing transformations, to ribonucleic acid sequencing data with varying sample sizes to assess their effectiveness in achieving symmetric data distributions. Our findings reveal that while normalization generally induces symmetry, some samples retain asymmetric distributions, challenging the conventional assumption of post-normalization symmetry. The Rp test, in particular, shows superior performance when there are variations in sample size and data distribution, making it a preferred tool for assessing symmetry when applied to genomic data. This finding underscores the importance of validating symmetry assumptions during data normalization, especially in genomic data, as overlooked asymmetries can lead to potential inaccuracies in downstream analyses. We analyze postmortem lateral temporal lobe samples to explore normal aging and Alzheimer’s disease, highlighting the critical role of symmetry testing in the accurate interpretation of genomic data.

Authors

Institutions

Publication Details

Journal
Stats
Published
2024-09-09
DOI
https://doi.org/10.3390/stats7030059
Citations
1
Primary Topic
Gene expression and cancer classification
Type
article
Field-Weighted Citation Impact
0.23
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A Statistical Methodology for Evaluating Asymmetry after Normalization with Application to Genomic Data

Myrian Elena Vergara Morales, Víctor Leiva, Jimmy Corzo, Raydonal Ospina et al.
1 citations
Stats
Gene expression and cancer classification
0.23
article

A Statistical Methodology for Evaluating Asymmetry after Normalization with Application to Genomic Data

Myrian Elena Vergara Morales, Víctor Leiva, Jimmy Corzo, Raydonal Ospina, Cecília Castro
article en
1 citations

Abstract

This study evaluates the symmetry of data distributions after normalization, focusing on various statistical tests, including a few explored test named Rp. We apply normalization techniques, such as variance stabilizing transformations, to ribonucleic acid sequencing data with varying sample sizes to assess their effectiveness in achieving symmetric data distributions. Our findings reveal that while normalization generally induces symmetry, some samples retain asymmetric distributions, challenging the conventional assumption of post-normalization symmetry. The Rp test, in particular, shows superior performance when there are variations in sample size and data distribution, making it a preferred tool for assessing symmetry when applied to genomic data. This finding underscores the importance of validating symmetry assumptions during data normalization, especially in genomic data, as overlooked asymmetries can lead to potential inaccuracies in downstream analyses. We analyze postmortem lateral temporal lobe samples to explore normal aging and Alzheimer’s disease, highlighting the critical role of symmetry testing in the accurate interpretation of genomic data.

StatsVol. 7(3)
Universidade Federal da Bahia (BR), Pontificia Universidad Católica de Valparaíso (CL), Universidade Federal de Pernambuco (BR), Universidad Nacional de Colombia (CO), University of La Salle (CO), University of Minho (PT)
Openalex Percentile: Top 43%
Gene expression and cancer classification
0.23
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.