Detection of diffusion anisotropy from an individual short particle trajectory

In parallel with advances in microscale imaging techniques, the fields of biology and materials science have focused on precisely extracting particle properties based on their diffusion behavior. Although the majority of real-world particles exhibit anisotropy, their behavior has been studied less than that of isotropic particles. In this study, we introduce a method for estimating the diffusion coefficients of individual anisotropic particles using short-trajectory data on the basis of a maximum likelihood framework. Traditional estimation techniques often use mean-squared displacement (MSD) values or other statistical measures that inherently remove angular information. Instead, we treated the angle as a latent variable and used belief propagation to estimate it while maximizing the likelihood using the expectation-maximization algorithm. Compared to conventional methods, this approach facilitates better estimation of shorter trajectories and faster rotations, as confirmed by numerical simulations and experimental data involving bacteria and quantum rods. Additionally, we performed an analytical investigation of the limits of detectability of anisotropy and provided guidelines for the experimental design. In addition to serving as a powerful tool for analyzing complex systems, the proposed method will pave the way for applying maximum likelihood methods to more complex diffusion phenomena. Published by the American Physical Society 2024

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Publication Details

Journal
Physical Review Research
Published
2024-09-09
DOI
https://doi.org/10.1103/physrevresearch.6.033272
Citations
1
Primary Topic
Characterization and Applications of Magnetic Nanoparticles
Type
article
Field-Weighted Citation Impact
0.18

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article

Detection of diffusion anisotropy from an individual short particle trajectory

Yoshiyuki Kabashima, Masafumi Kuroda, Yasushi Okada, Sawako Enoki et al.
1 citations
Physical Review Research
Characterization and Applications of Magnetic Nanoparticles
0.18
article

Detection of diffusion anisotropy from an individual short particle trajectory

Yoshiyuki Kabashima, Masafumi Kuroda, Yasushi Okada, Sawako Enoki, Daisuke Taniguchi, Kaito Takanami
article en
1 citations

Abstract

In parallel with advances in microscale imaging techniques, the fields of biology and materials science have focused on precisely extracting particle properties based on their diffusion behavior. Although the majority of real-world particles exhibit anisotropy, their behavior has been studied less than that of isotropic particles. In this study, we introduce a method for estimating the diffusion coefficients of individual anisotropic particles using short-trajectory data on the basis of a maximum likelihood framework. Traditional estimation techniques often use mean-squared displacement (MSD) values or other statistical measures that inherently remove angular information. Instead, we treated the angle as a latent variable and used belief propagation to estimate it while maximizing the likelihood using the expectation-maximization algorithm. Compared to conventional methods, this approach facilitates better estimation of shorter trajectories and faster rotations, as confirmed by numerical simulations and experimental data involving bacteria and quantum rods. Additionally, we performed an analytical investigation of the limits of detectability of anisotropy and provided guidelines for the experimental design. In addition to serving as a powerful tool for analyzing complex systems, the proposed method will pave the way for applying maximum likelihood methods to more complex diffusion phenomena. Published by the American Physical Society 2024

Physical Review ResearchVol. 6(3)
RIKEN Center for Biosystems Dynamics Research (JP), The University of Tokyo (JP)
Japan Society for the Promotion of Science, Japan Science and Technology Agency
Openalex Percentile: Top 53%
Characterization and Applications of Magnetic Nanoparticles
0.18
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