Minute-timescale free-energy calculations reveal a pseudo-active state in the adenosine A2A receptor activation mechanism

G protein-coupled receptors (GPCRs) are membrane proteins targeted by over one-third of marketed drugs. Understanding their activation mechanism is essential for precise regulation of drug pharmacological response. In this work, we elucidate the conformational landscape of the adenosine A<sub>2A</sub> receptor (A<sub>2A</sub>R) activation mechanism in its basal apo form and under different ligand-bound conditions through minute-timescale free-energy calculations. We identified a pseudo-active state (pAs) of the A<sub>2A</sub>R apo form, stabilized by specific "<i>microswitch</i>" residues, including a salt bridge established between the conserved residues R<sup>5.66</sup> and E<sup>6.30</sup>. The pAs enables A<sub>2A</sub>R to couple with Gs protein upon rearrangement of the intracellular end of transmembrane helix 6, providing unprecedented structural insights into receptor function and signaling dynamics. Our simulation protocol is versatile and can be adapted to study the activation of any GPCRs, potentially making it a valuable tool for drug design and "<i>biased signaling</i>" studies.

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Publication Details

Journal
Chem
Published
2024-09-09
DOI
https://doi.org/10.1016/j.chempr.2024.08.004
Citations
16
Primary Topic
Receptor Mechanisms and Signaling
Type
article
Field-Weighted Citation Impact
3.51

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article

Minute-timescale free-energy calculations reveal a pseudo-active state in the adenosine A2A receptor activation mechanism

Luciana Marinelli, Vincenzo Maria D’Amore, Vittorio Limongelli, Paolo Conflitti
16 citations
Chem
Receptor Mechanisms and Signaling
3.51
article

Minute-timescale free-energy calculations reveal a pseudo-active state in the adenosine A2A receptor activation mechanism

Luciana Marinelli, Vincenzo Maria D’Amore, Vittorio Limongelli, Paolo Conflitti
article en
16 citations

Abstract

G protein-coupled receptors (GPCRs) are membrane proteins targeted by over one-third of marketed drugs. Understanding their activation mechanism is essential for precise regulation of drug pharmacological response. In this work, we elucidate the conformational landscape of the adenosine A<sub>2A</sub> receptor (A<sub>2A</sub>R) activation mechanism in its basal apo form and under different ligand-bound conditions through minute-timescale free-energy calculations. We identified a pseudo-active state (pAs) of the A<sub>2A</sub>R apo form, stabilized by specific "<i>microswitch</i>" residues, including a salt bridge established between the conserved residues R<sup>5.66</sup> and E<sup>6.30</sup>. The pAs enables A<sub>2A</sub>R to couple with Gs protein upon rearrangement of the intracellular end of transmembrane helix 6, providing unprecedented structural insights into receptor function and signaling dynamics. Our simulation protocol is versatile and can be adapted to study the activation of any GPCRs, potentially making it a valuable tool for drug design and "<i>biased signaling</i>" studies.

ChemVol. 10(12)
Università della Svizzera italiana (CH), University of Naples Federico II (IT)
Università degli Studi di Napoli Federico II, Centro Svizzero di Calcolo Scientifico, Horizon 2020 Framework Programme, European Research Council, Horizon 2020, H2020 European Research Council
Affordable and clean energy
Openalex Percentile: Top 7%
Receptor Mechanisms and Signaling
3.51
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Minute-timescale free-energy calculations reveal a pseudo-active state in the adenosine A2A receptor activation mechanism — Luciana Marinelli, Vincenzo Maria D’Amore, et al. · Chem (2024) | TGRS Research Map | TGRS