Guide assignment in single-cell CRISPR screens using crispat
crispat is implemented in python, the source code, installation instructions and tutorials can be found at https://github.com/velten-group/crispat and it can be installed from PyPI (https://pypi.org/project/crispat/). Code to reproduce all findings in this paper is available at https://github.com/velten-group/crispat_analysis, as well as at https://zenodo.org/records/13373265.
Authors
- Jana M. Braunger (ORCID: https://orcid.org/0000-0003-0820-9987)
- Britta Velten (ORCID: https://orcid.org/0000-0002-8397-3515)
Institutions
- Heidelberg University (DE)
Publication Details
- Journal
- Bioinformatics
- Published
- 2024-09-01
- DOI
- https://doi.org/10.1093/bioinformatics/btae535
- Citations
- 6
- Primary Topic
- CRISPR and Genetic Engineering
- Type
- article
- Field-Weighted Citation Impact
- 1.40
Funders
- Deutsche Forschungsgemeinschaft