Comparison of Different HIV-1 Resistance Interpretation Tools for Next-Generation Sequencing in Italy

This Italian survey on NGS resistance testing suggests that viremia levels and HIV subtype affect NGS-GRT coverage. Within the current routine method for NGS-GRT, only mutations with frequency >10% seem reliably detected across different interpretation tools.

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Publication Details

Journal
Viruses
Published
2024-09-06
DOI
https://doi.org/10.3390/v16091422
Citations
7
Primary Topic
HIV/AIDS drug development and treatment
Type
article
Field-Weighted Citation Impact
2.72
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article

Comparison of Different HIV-1 Resistance Interpretation Tools for Next-Generation Sequencing in Italy

Maurizio Zazzi, Daniele Armenia, Tiziano Allice, Luca Carioti et al.
7 citations
Viruses
HIV/AIDS drug development and treatment
2.72
article

Comparison of Different HIV-1 Resistance Interpretation Tools for Next-Generation Sequencing in Italy

Maurizio Zazzi, Daniele Armenia, Tiziano Allice, Luca Carioti, Fiorenza Bracchitta, Bianca Bruzzone, Federica Stefanelli, Maria Mercedes Santoro, Ilaria Vicenti, Isabella Bon, Ada Bertoli, Anna Giammanco, Maria Rosaria Lipsi, Antonia Bezenchek, Gabriele Ibba, Francesca Ceccherini‐Silberstein, Nunzia Cuomo, Federica Novazzi, Valeria Micheli, Maria A. Bonifacio, Barbara Rossetti, Francesco Saladini, Francesco Cerutti, Celestino Bonura, M Vatteroni
article en
7 citations

Abstract

This Italian survey on NGS resistance testing suggests that viremia levels and HIV subtype affect NGS-GRT coverage. Within the current routine method for NGS-GRT, only mutations with frequency >10% seem reliably detected across different interpretation tools.

VirusesVol. 16(9)
University of Siena (IT), University of Pisa (IT), University of Insubria (IT), University of Rome Tor Vergata (IT), University of Milan (IT), Ospedali Riuniti di Foggia (IT), Saint Camillus International University of Health and Medical Sciences (IT), Informa (Italy) (IT), Ospedale Amedeo di Savoia (IT), Azienda USL di Bologna (IT), Policlinico Tor Vergata (IT), Ospedale Misericordia - Grosseto (IT), European Society of Concurrent Enterprising Network (IT), Ospedale Policlinico San Martino (IT), Azienda Ospedaliera Universitaria Policlinico "Paolo Giaccone" di Palermo (IT), Ospedale D. Cotugno (IT), ASST Fatebenefratelli Sacco (IT), University of Bari Aldo Moro (IT), University of Palermo (IT)
Openalex Percentile: Top 9%
HIV/AIDS drug development and treatment
2.72
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