Unveiling the solution structure of a DNA duplex with continuous silver-modified Watson-Crick base pairs
The challenge of transforming organized DNA structures into their metallized counterparts persists in the scientific field. In this context, utilizing DNA molecules modified with 7-deazapurine, provides a transformative solution. In this study, we present the solution structure of a DNA duplex that can be transformed into its metallized equivalent while retaining the natural base pairing arrangement through the creation of silver-modified Watson-Crick base pairs. Unlike previously documented X-ray structures, our research demonstrates the feasibility of preserving the intrinsic DNA self-assembly while incorporating Ag<sup>I</sup> into the double helix, illustrating that the binding of silver does not disrupt the canonical base-pairing organization. Moreover, in our case, the uninterrupted Ag<sup>I</sup> chain deviates from forming conventional straight linear chains; instead, it adheres to a helical arrangement dictated by the underlying DNA structure. This research challenges conventional assumptions and opens the door to precisely design structures based on the organization of highly stable Ag-DNA assemblies.
Authors
- Antonio Pérez‐Romero (ORCID: https://orcid.org/0000-0003-4418-4414)
- Miguel A. Galindo (ORCID: https://orcid.org/0000-0003-4355-4313)
- Uroš Javornik (ORCID: https://orcid.org/0000-0002-7959-6681)
- May Nyman (ORCID: https://orcid.org/0000-0002-1787-0518)
- Mrinal K. Bera (ORCID: https://orcid.org/0000-0003-4382-6841)
- Janez Plavec (ORCID: https://orcid.org/0000-0003-1570-8602)
- Òscar Palacios (ORCID: https://orcid.org/0000-0002-2987-7303)
- José A. Dobado (ORCID: https://orcid.org/0000-0001-7714-1715)
- Carmen López-Chamorro
- Rachelle M. Smith
Institutions
- Universitat Autònoma de Barcelona (ES)
- Oregon State University (US)
- University of Ljubljana (SI)
- Universidad de Granada (ES)
- University of Chicago (US)
- National Institute of Chemistry (SI)
Publication Details
- Journal
- Nature Communications
- Published
- 2024-09-05
- DOI
- https://doi.org/10.1038/s41467-024-51876-8
- Citations
- 13
- Primary Topic
- Advanced biosensing and bioanalysis techniques
- Type
- article
- Field-Weighted Citation Impact
- 3.04
Funders
- National Science Foundation
- U.S. Department of Energy
- Oregon State University
- Generalitat de Catalunya
- Javna Agencija za Raziskovalno Dejavnost RS
- Ministerio de Ciencia e Innovación
- Universidad de Granada
- Office of Science
- Division of Materials Research
- Division of Chemistry
- Argonne National Laboratory