Unveiling the solution structure of a DNA duplex with continuous silver-modified Watson-Crick base pairs

The challenge of transforming organized DNA structures into their metallized counterparts persists in the scientific field. In this context, utilizing DNA molecules modified with 7-deazapurine, provides a transformative solution. In this study, we present the solution structure of a DNA duplex that can be transformed into its metallized equivalent while retaining the natural base pairing arrangement through the creation of silver-modified Watson-Crick base pairs. Unlike previously documented X-ray structures, our research demonstrates the feasibility of preserving the intrinsic DNA self-assembly while incorporating Ag<sup>I</sup> into the double helix, illustrating that the binding of silver does not disrupt the canonical base-pairing organization. Moreover, in our case, the uninterrupted Ag<sup>I</sup> chain deviates from forming conventional straight linear chains; instead, it adheres to a helical arrangement dictated by the underlying DNA structure. This research challenges conventional assumptions and opens the door to precisely design structures based on the organization of highly stable Ag-DNA assemblies.

Authors

Institutions

Publication Details

Journal
Nature Communications
Published
2024-09-05
DOI
https://doi.org/10.1038/s41467-024-51876-8
Citations
13
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
3.04

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Unveiling the solution structure of a DNA duplex with continuous silver-modified Watson-Crick base pairs

Antonio Pérez‐Romero, Miguel A. Galindo, Uroš Javornik, May Nyman et al.
13 citations
Nature Communications
Advanced biosensing and bioanalysis techniques
3.04
article

Unveiling the solution structure of a DNA duplex with continuous silver-modified Watson-Crick base pairs

Antonio Pérez‐Romero, Miguel A. Galindo, Uroš Javornik, May Nyman, Mrinal K. Bera, Janez Plavec, Òscar Palacios, José A. Dobado, Carmen López-Chamorro, Rachelle M. Smith
article en
13 citations

Abstract

The challenge of transforming organized DNA structures into their metallized counterparts persists in the scientific field. In this context, utilizing DNA molecules modified with 7-deazapurine, provides a transformative solution. In this study, we present the solution structure of a DNA duplex that can be transformed into its metallized equivalent while retaining the natural base pairing arrangement through the creation of silver-modified Watson-Crick base pairs. Unlike previously documented X-ray structures, our research demonstrates the feasibility of preserving the intrinsic DNA self-assembly while incorporating Ag<sup>I</sup> into the double helix, illustrating that the binding of silver does not disrupt the canonical base-pairing organization. Moreover, in our case, the uninterrupted Ag<sup>I</sup> chain deviates from forming conventional straight linear chains; instead, it adheres to a helical arrangement dictated by the underlying DNA structure. This research challenges conventional assumptions and opens the door to precisely design structures based on the organization of highly stable Ag-DNA assemblies.

Nature CommunicationsVol. 15(1)
Universitat Autònoma de Barcelona (ES), Oregon State University (US), University of Ljubljana (SI), Universidad de Granada (ES), University of Chicago (US), National Institute of Chemistry (SI)
National Science Foundation, U.S. Department of Energy, Oregon State University, Generalitat de Catalunya, Javna Agencija za Raziskovalno Dejavnost RS, Ministerio de Ciencia e Innovación, Universidad de Granada, Office of Science, Division of Materials Research, Division of Chemistry, Argonne National Laboratory
Openalex Percentile: Top 8%
Advanced biosensing and bioanalysis techniques
3.04
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.