Transcriptome dataset of Metroxylon sagu palms from multiple sago plantations in Sarawak

The conventional CTAB method was employed in the present investigation to extract total RNA from leaf tissues. Transcriptome sequencing was conducted on the Illumina NovaSeq 6000 platform. Differential expression analysis was performed using the DESeq2 package. A total of 6,119 differentially expressed genes, comprising 4,384 downregulated and 1,735 upregulated genes, were expressed in all three sago palm datasets. The datasets provide insights into the commonly expressed genes among trunking sago palms.

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Journal
BMC Research Notes
Published
2024-09-05
DOI
https://doi.org/10.1186/s13104-024-06924-3
Primary Topic
Oil Palm Production and Sustainability
Type
article
Field-Weighted Citation Impact
0.00

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article

Transcriptome dataset of Metroxylon sagu palms from multiple sago plantations in Sarawak

Fifi Hafizzah Pendi, Hasnain Hussain
BMC Research Notes
Oil Palm Production and Sustainability
article

Transcriptome dataset of Metroxylon sagu palms from multiple sago plantations in Sarawak

Fifi Hafizzah Pendi, Hasnain Hussain
article en

Abstract

The conventional CTAB method was employed in the present investigation to extract total RNA from leaf tissues. Transcriptome sequencing was conducted on the Illumina NovaSeq 6000 platform. Differential expression analysis was performed using the DESeq2 package. A total of 6,119 differentially expressed genes, comprising 4,384 downregulated and 1,735 upregulated genes, were expressed in all three sago palm datasets. The datasets provide insights into the commonly expressed genes among trunking sago palms.

BMC Research NotesVol. 17(1)
Universiti Malaysia Sarawak (MY)
Sugar Research and Development Corporation, Universiti Malaysia Sarawak
Zero hunger
Openalex Percentile: Top 85%
Oil Palm Production and Sustainability
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