Metagenomic functional profiling: to sketch or not to sketch?
This fast and lightweight metagenomic functional profiler is freely available and can be accessed here: https://github.com/KoslickiLab/fmh-funprofiler. All scripts of the analyses we present in this manuscript can be found on GitHub.
Authors
- David Koslicki (ORCID: https://orcid.org/0000-0002-0640-954X)
- Chunyu Ma (ORCID: https://orcid.org/0000-0001-9731-5153)
- Judith Rodríguez (ORCID: https://orcid.org/0000-0002-5109-3054)
- Mahmudur Rahman Hera (ORCID: https://orcid.org/0000-0002-5992-9012)
- Wei Wei
- Shaopeng Liu (ORCID: https://orcid.org/0000-0003-0539-083X)
Institutions
- Pennsylvania State University (US)
Publication Details
- Journal
- Bioinformatics
- Published
- 2024-09-01
- DOI
- https://doi.org/10.1093/bioinformatics/btae397
- Citations
- 10
- Primary Topic
- Gut microbiota and health
- Type
- article
- Field-Weighted Citation Impact
- 2.34
Funders
- National Institutes of Health