Characterization of TBP and TAFs in Mungbean (Vigna radiata L.) and Their Potential Involvement in Abiotic Stress Response

The TATA-box binding protein (TBP) and TBP-associated factors (TAFs) constitute the transcription factor IID (TFIID), a crucial component of RNA polymerase II, essential for transcription initiation and regulation. Several TFIID subunits are shared with the Spt-Ada-Gcn5-acetyltransferase (SAGA) coactivator complex. Recent research has revealed the roles of TBP and TAFs in organogenesis and stress adaptation. In this study, we identified 1 TBP and 21 putative TAFs in the mungbean genome, among which <i>VrTAF5</i>, <i>VrTAF6</i>, <i>VrTAF8</i>, <i>VrTAF9</i>, <i>VrTAF14</i>, and <i>VrTAF15</i> have paralogous genes. Their potential involvement in abiotic stress responses was also investigated here, including high salinity, water deficit, heat, and cold. The findings indicated that distinct genes exerted predominant influences in the response to different abiotic stresses through potentially unique mechanisms. Specifically, under salt stress, <i>VrTBP</i>, <i>VrTAF2</i>, and <i>VrTAF15-1</i> were strongly induced, while <i>VrTAF10</i>, <i>VrTAF11</i>, and <i>VrTAF13</i> acted as negative regulators. In the case of water-deficit stress, it was likely that <i>VrTAF1</i>, <i>VrTAF2</i>, <i>VrTAF5-2</i>, <i>VrTAF9</i>, and <i>VrTAF15-1</i> were primarily involved. Additionally, in response to changes in ambient temperature, it was possible that genes such as <i>VrTAF5-1</i>, <i>VrTAF6-1</i>, <i>VrTAF9-2</i>, <i>VrTAF10</i>, <i>VrTAF13</i>, <i>VrTAF14b-2</i>, and <i>VrTAF15-1</i> might play a dominant role. This comprehensive exploration of <i>VrTBP</i> and <i>VrTAFs</i> can offer a new perspective on understanding plant stress responses and provide valuable insights into breeding improvement.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2024-09-03
DOI
https://doi.org/10.3390/ijms25179558
Citations
2
Primary Topic
Plant Stress Responses and Tolerance
Type
article
Field-Weighted Citation Impact
1.20

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article

Characterization of TBP and TAFs in Mungbean (Vigna radiata L.) and Their Potential Involvement in Abiotic Stress Response

Jingbin Chen, Ranran Wu, Na Yuan, Chenchen Xue et al.
2 citations
International Journal of Molecular Sciences
Plant Stress Responses and Tolerance
1.20
article

Characterization of TBP and TAFs in Mungbean (Vigna radiata L.) and Their Potential Involvement in Abiotic Stress Response

Jingbin Chen, Ranran Wu, Na Yuan, Chenchen Xue, Yingjian Guo, Xin Chen, Jinyang Liu, Qiyuan Jia, Yun Lin, Qiang Yan, Xingxing Yuan
article en
2 citations

Abstract

The TATA-box binding protein (TBP) and TBP-associated factors (TAFs) constitute the transcription factor IID (TFIID), a crucial component of RNA polymerase II, essential for transcription initiation and regulation. Several TFIID subunits are shared with the Spt-Ada-Gcn5-acetyltransferase (SAGA) coactivator complex. Recent research has revealed the roles of TBP and TAFs in organogenesis and stress adaptation. In this study, we identified 1 TBP and 21 putative TAFs in the mungbean genome, among which <i>VrTAF5</i>, <i>VrTAF6</i>, <i>VrTAF8</i>, <i>VrTAF9</i>, <i>VrTAF14</i>, and <i>VrTAF15</i> have paralogous genes. Their potential involvement in abiotic stress responses was also investigated here, including high salinity, water deficit, heat, and cold. The findings indicated that distinct genes exerted predominant influences in the response to different abiotic stresses through potentially unique mechanisms. Specifically, under salt stress, <i>VrTBP</i>, <i>VrTAF2</i>, and <i>VrTAF15-1</i> were strongly induced, while <i>VrTAF10</i>, <i>VrTAF11</i>, and <i>VrTAF13</i> acted as negative regulators. In the case of water-deficit stress, it was likely that <i>VrTAF1</i>, <i>VrTAF2</i>, <i>VrTAF5-2</i>, <i>VrTAF9</i>, and <i>VrTAF15-1</i> were primarily involved. Additionally, in response to changes in ambient temperature, it was possible that genes such as <i>VrTAF5-1</i>, <i>VrTAF6-1</i>, <i>VrTAF9-2</i>, <i>VrTAF10</i>, <i>VrTAF13</i>, <i>VrTAF14b-2</i>, and <i>VrTAF15-1</i> might play a dominant role. This comprehensive exploration of <i>VrTBP</i> and <i>VrTAFs</i> can offer a new perspective on understanding plant stress responses and provide valuable insights into breeding improvement.

International Journal of Molecular SciencesVol. 25(17)
Nanjing Agricultural University (CN), Jiangsu Academy of Agricultural Sciences (CN)
National Natural Science Foundation of China
Clean water and sanitation
Openalex Percentile: Top 16%
Plant Stress Responses and Tolerance
1.20
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