Structural Optimization and Structure–Activity Relationship of 1<i>H</i>-Pyrazole-4-carboxylic Acid Derivatives as DNA 6mA Demethylase ALKBH1 Inhibitors and Their Antigastric Cancer Activity

DNA <i>N</i><sup>6</sup>-methyladenine (6mA) demethylase ALKBH1 plays an important role in various cellular processes. Dysregulation of ALKBH1 is associated with the development of some cancer types, including gastric cancer, implicating a potential therapeutic target. However, there is still a lack of potent ALKBH1 inhibitors. Herein, we report the discovery of a highly potent ALKBH1 inhibitor, 1<i>H</i>-pyrazole-4-carboxylic acid derivative <b>29</b>. The structure-activity relationship of this series of compounds was also discussed. Because of the poor cell membrane permeability of <b>29</b>, we prepared a prodrug of <b>29</b> (<b>29E</b>), which showed excellent cellular activities. In gastric cancer cell lines HGC27 and AGS, <b>29E</b> treatment significantly increased the abundance of 6mA, inhibited cell viability, and upregulated the AMP-activated protein kinase (AMPK) signaling pathway. In addition, the hydrolysis product <b>29</b> showed high exposure in mice after administration of <b>29E</b>. Collectively, this research provides a new potent ALKBH1 inhibitor, which could serve as a lead compound for subsequent drug development.

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Publication Details

Journal
Journal of Medicinal Chemistry
Published
2024-09-03
DOI
https://doi.org/10.1021/acs.jmedchem.4c01072
Citations
6
Primary Topic
Epigenetics and DNA Methylation
Type
article
Field-Weighted Citation Impact
1.40

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article

Structural Optimization and Structure–Activity Relationship of 1H-Pyrazole-4-carboxylic Acid Derivatives as DNA 6mA Demethylase ALKBH1 Inhibitors and Their Antigastric Cancer Activity

Ke Xu, Yinping Guo, Shengyong Yang, Liang Xiong et al.
6 citations
Journal of Medicinal Chemistry
Epigenetics and DNA Methylation
1.40
article

Structural Optimization and Structure–Activity Relationship of 1H-Pyrazole-4-carboxylic Acid Derivatives as DNA 6mA Demethylase ALKBH1 Inhibitors and Their Antigastric Cancer Activity

Ke Xu, Yinping Guo, Shengyong Yang, Liang Xiong, Aiping Tong, Zijie Xiong, Yuyang Wang, Jian Zhang, Feng Li, Linli Li, Shanmian Ji
article en
6 citations

Abstract

DNA <i>N</i><sup>6</sup>-methyladenine (6mA) demethylase ALKBH1 plays an important role in various cellular processes. Dysregulation of ALKBH1 is associated with the development of some cancer types, including gastric cancer, implicating a potential therapeutic target. However, there is still a lack of potent ALKBH1 inhibitors. Herein, we report the discovery of a highly potent ALKBH1 inhibitor, 1<i>H</i>-pyrazole-4-carboxylic acid derivative <b>29</b>. The structure-activity relationship of this series of compounds was also discussed. Because of the poor cell membrane permeability of <b>29</b>, we prepared a prodrug of <b>29</b> (<b>29E</b>), which showed excellent cellular activities. In gastric cancer cell lines HGC27 and AGS, <b>29E</b> treatment significantly increased the abundance of 6mA, inhibited cell viability, and upregulated the AMP-activated protein kinase (AMPK) signaling pathway. In addition, the hydrolysis product <b>29</b> showed high exposure in mice after administration of <b>29E</b>. Collectively, this research provides a new potent ALKBH1 inhibitor, which could serve as a lead compound for subsequent drug development.

Journal of Medicinal ChemistryVol. 67(17)
Sichuan University (CN), State Key Laboratory of Biotherapy
National Natural Science Foundation of China, China Postdoctoral Science Foundation, Sichuan University, Sichuan Province Science and Technology Support Program, National Key Research and Development Program of China, Fundamental Research Funds for the Central Universities, West China Hospital, Sichuan University
Good health and well-being
Openalex Percentile: Top 19%
Epigenetics and DNA Methylation
1.40
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