A Genomic Sequence Resource of Diaporthe mahothocarpus GZU-Y2 Causing Leaf Spot Blight in Camellia oleifera

<i>Diaporthe mahothocarpus</i> GZU-Y2, a new pathogen responsible for leaf spot blight disease, leads to significant damage and economic losses in some <i>Camellia oleifera</i> plantations. The current study annotated the genome of the <i>D. mahothocarpus</i> isolate GZU-Y2 to advance our knowledge of the pathogen and facilitate improved disease management of leaf spot blight. The initial Pacbio-Illumina hybrid draft genome for GZU-Y2 resulted in a high-quality assembly with 62 contigs, characterized by an N50 length of 7.07 Mb. The complete genome of isolate GZU-Y2 was 58.97 Mbp, with a GC content of 50.65%. Importantly, the assembly exhibits remarkable integrity, with 97.93% of complete BUSCO validating genome completeness. The prediction results showed that a total of 15,918 protein-coding genes were annotated using multiple bioinformatics databases. The genome assembly and annotation resource reported here will be useful for the further study of fungal infection mechanisms and pathogen-host interaction.

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Publication Details

Journal
Journal of Fungi
Published
2024-09-03
DOI
https://doi.org/10.3390/jof10090630
Primary Topic
Plant Pathogens and Fungal Diseases
Type
article
Field-Weighted Citation Impact
0.00

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article

A Genomic Sequence Resource of Diaporthe mahothocarpus GZU-Y2 Causing Leaf Spot Blight in Camellia oleifera

Yunze Chen, Jing Yang, Liang Yu, Xulong Shi
Journal of Fungi
Plant Pathogens and Fungal Diseases
article

A Genomic Sequence Resource of Diaporthe mahothocarpus GZU-Y2 Causing Leaf Spot Blight in Camellia oleifera

Yunze Chen, Jing Yang, Liang Yu, Xulong Shi
article en

Abstract

<i>Diaporthe mahothocarpus</i> GZU-Y2, a new pathogen responsible for leaf spot blight disease, leads to significant damage and economic losses in some <i>Camellia oleifera</i> plantations. The current study annotated the genome of the <i>D. mahothocarpus</i> isolate GZU-Y2 to advance our knowledge of the pathogen and facilitate improved disease management of leaf spot blight. The initial Pacbio-Illumina hybrid draft genome for GZU-Y2 resulted in a high-quality assembly with 62 contigs, characterized by an N50 length of 7.07 Mb. The complete genome of isolate GZU-Y2 was 58.97 Mbp, with a GC content of 50.65%. Importantly, the assembly exhibits remarkable integrity, with 97.93% of complete BUSCO validating genome completeness. The prediction results showed that a total of 15,918 protein-coding genes were annotated using multiple bioinformatics databases. The genome assembly and annotation resource reported here will be useful for the further study of fungal infection mechanisms and pathogen-host interaction.

Journal of FungiVol. 10(9)
Guizhou University (CN), Guizhou Education University (CN)
Guizhou University, Department of Education of Guizhou Province
Openalex Percentile: Top 85%
Plant Pathogens and Fungal Diseases
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