Variant graph craft (VGC): a comprehensive tool for analyzing genetic variation and identifying disease-causing variants

In summary, VGC provides a comprehensive set of features tailored to researchers working with genomic variation data. Its intuitive interface, rapid filtering capabilities, and the flexibility to perform queries using custom groups make it an effective tool in identifying variants potentially associated with diseases. VGC operates locally, ensuring data security and privacy by eliminating the need for cloud-based VCF uploads, making it a secure and user-friendly tool. It is freely available at https://github.com/alperuzun/VGC .

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Institutions

Publication Details

Journal
BMC Bioinformatics
Published
2024-09-03
DOI
https://doi.org/10.1186/s12859-024-05875-7
Citations
1
Primary Topic
Genomics and Rare Diseases
Type
article
Field-Weighted Citation Impact
0.55

Funders

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article

Variant graph craft (VGC): a comprehensive tool for analyzing genetic variation and identifying disease-causing variants

Ece D. Gamsiz Uzun, Lauren Massingham, Jennifer Li, Benedito A. Carneiro et al.
1 citations
BMC Bioinformatics
Genomics and Rare Diseases
0.55
article

Variant graph craft (VGC): a comprehensive tool for analyzing genetic variation and identifying disease-causing variants

Ece D. Gamsiz Uzun, Lauren Massingham, Jennifer Li, Benedito A. Carneiro, Alper Uzun, Andy Yang
article en
1 citations

Abstract

In summary, VGC provides a comprehensive set of features tailored to researchers working with genomic variation data. Its intuitive interface, rapid filtering capabilities, and the flexibility to perform queries using custom groups make it an effective tool in identifying variants potentially associated with diseases. VGC operates locally, ensuring data security and privacy by eliminating the need for cloud-based VCF uploads, making it a secure and user-friendly tool. It is freely available at https://github.com/alperuzun/VGC .

BMC BioinformaticsVol. 25(1)
Providence College (US), Brown University (US), Rhode Island Hospital (US), Lifespan (US)
Brown University
Openalex Percentile: Top 26%
Genomics and Rare Diseases
0.55
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