Genome-Wide Identification of GH17s Family Genes and Biological Function Analysis of SlA6 in Tomato

Glycoside hydrolases (GHs), enzymes that break down glycosidic bonds in carbohydrates and between carbohydrates and non-carbohydrates, are prevalent in plants, animals, microorganisms, and other organisms. The tomato is a significant crop that contains the GH17 gene family. However, its role in tomatoes has yet to be fully investigated. In this study, we identified 43 GH17 genes from the tomato genome, distributed unevenly across 12 chromosomes. We further analyzed their gene structure, phylogenetic relationships, promoter elements, and expression patterns. The promoter element analysis indicated their potential roles in response to biotic and abiotic stresses as well as phytohormone effects on growth and development. The expression studies across different tomato tissues revealed that 10 genes were specifically expressed in floral organs, with SlA6 prominently expressed early during bud formation. By using CRISPR/Cas9 gene-editing technology, <i>SlA6</i> knockout plants were generated. Phenotypic characterization showed that pollen viability, pollen tube germination, fruit weight, and seed number were significantly reduced in the <i>Sla6</i> mutant, but the soluble solids content (TSS) was significantly higher in the <i>Sla6</i> mutant, suggesting that SlA6 affects pollen development and fruit quality.

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Publication Details

Journal
Plants
Published
2024-09-01
DOI
https://doi.org/10.3390/plants13172443
Citations
1
Primary Topic
Plant Reproductive Biology
Type
article
Field-Weighted Citation Impact
0.23

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article

Genome-Wide Identification of GH17s Family Genes and Biological Function Analysis of SlA6 in Tomato

Yinghua Yang, Zhengkun Qiu, Riyuan Chen, Da Chen et al.
1 citations
Plants
Plant Reproductive Biology
0.23
article

Genome-Wide Identification of GH17s Family Genes and Biological Function Analysis of SlA6 in Tomato

Yinghua Yang, Zhengkun Qiu, Riyuan Chen, Da Chen, Yanwei Hao, Hongling Guan, Zaohai Zeng, Yiwen Yao, Caiyu Wu, Yuxiang Lin, Xiaomin Wang, Qiuxiang Zhong, Canye Yu, Xinyue Zhang, Rui Xia, Huimin Hu, Caihong Huang, Chongjian Ma
article en
1 citations

Abstract

Glycoside hydrolases (GHs), enzymes that break down glycosidic bonds in carbohydrates and between carbohydrates and non-carbohydrates, are prevalent in plants, animals, microorganisms, and other organisms. The tomato is a significant crop that contains the GH17 gene family. However, its role in tomatoes has yet to be fully investigated. In this study, we identified 43 GH17 genes from the tomato genome, distributed unevenly across 12 chromosomes. We further analyzed their gene structure, phylogenetic relationships, promoter elements, and expression patterns. The promoter element analysis indicated their potential roles in response to biotic and abiotic stresses as well as phytohormone effects on growth and development. The expression studies across different tomato tissues revealed that 10 genes were specifically expressed in floral organs, with SlA6 prominently expressed early during bud formation. By using CRISPR/Cas9 gene-editing technology, <i>SlA6</i> knockout plants were generated. Phenotypic characterization showed that pollen viability, pollen tube germination, fruit weight, and seed number were significantly reduced in the <i>Sla6</i> mutant, but the soluble solids content (TSS) was significantly higher in the <i>Sla6</i> mutant, suggesting that SlA6 affects pollen development and fruit quality.

PlantsVol. 13(17)
South China Agricultural University (CN), Chongqing University (CN), Yulin Normal University (CN), Shaoguan University (CN)
National Natural Science Foundation of China, Natural Science Foundation of Guangdong Province, Natural Science Foundation of Guangxi Province
Openalex Percentile: Top 43%
Plant Reproductive Biology
0.23
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