Knowledge-Aware Multisite Adaptive Graph Transformer for Brain Disorder Diagnosis

Brain disorder diagnosis via resting-state functional magnetic resonance imaging (rs-fMRI) is usually limited due to the complex imaging features and sample size. For brain disorder diagnosis, the graph convolutional network (GCN) has achieved remarkable success by capturing interactions between individuals and the population. However, there are mainly three limitations: 1) The previous GCN approaches consider the non-imaging information in edge construction but ignore the sensitivity differences of features to non-imaging information. 2) The previous GCN approaches solely focus on establishing interactions between subjects (i.e., individuals and the population), disregarding the essential relationship between features. 3) Multisite data increase the sample size to help classifier training, but the inter-site heterogeneity limits the performance to some extent. This paper proposes a knowledge-aware multisite adaptive graph Transformer to address the above problems. First, we evaluate the sensitivity of features to each piece of non-imaging information, and then construct feature-sensitive and feature-insensitive subgraphs. Second, after fusing the above subgraphs, we integrate a Transformer module to capture the intrinsic relationship between features. Third, we design a domain adaptive GCN using multiple loss function terms to relieve data heterogeneity and to produce the final classification results. Last, the proposed framework is validated on two brain disorder diagnostic tasks. Experimental results show that the proposed framework can achieve state-of-the-art performance.

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Publication Details

Journal
IEEE Transactions on Medical Imaging
Published
2024-09-02
DOI
https://doi.org/10.1109/tmi.2024.3453419
Citations
5
Primary Topic
Brain Tumor Detection and Classification
Type
article
Field-Weighted Citation Impact
1.24

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article

Knowledge-Aware Multisite Adaptive Graph Transformer for Brain Disorder Diagnosis

Baiying Lei, Tianfu Wang, Feng Zhou, Xiaohua Xiao et al.
5 citations
IEEE Transactions on Medical Imaging
Brain Tumor Detection and Classification
1.24
article

Knowledge-Aware Multisite Adaptive Graph Transformer for Brain Disorder Diagnosis

Baiying Lei, Tianfu Wang, Feng Zhou, Xiaohua Xiao, Alejandro Federico Frangi, Xuegang Song, Shuqiang Wang, Lei Dong, Peng Yang, Kaixiang Shu, Cheng Zhao
article en
5 citations

Abstract

Brain disorder diagnosis via resting-state functional magnetic resonance imaging (rs-fMRI) is usually limited due to the complex imaging features and sample size. For brain disorder diagnosis, the graph convolutional network (GCN) has achieved remarkable success by capturing interactions between individuals and the population. However, there are mainly three limitations: 1) The previous GCN approaches consider the non-imaging information in edge construction but ignore the sensitivity differences of features to non-imaging information. 2) The previous GCN approaches solely focus on establishing interactions between subjects (i.e., individuals and the population), disregarding the essential relationship between features. 3) Multisite data increase the sample size to help classifier training, but the inter-site heterogeneity limits the performance to some extent. This paper proposes a knowledge-aware multisite adaptive graph Transformer to address the above problems. First, we evaluate the sensitivity of features to each piece of non-imaging information, and then construct feature-sensitive and feature-insensitive subgraphs. Second, after fusing the above subgraphs, we integrate a Transformer module to capture the intrinsic relationship between features. Third, we design a domain adaptive GCN using multiple loss function terms to relieve data heterogeneity and to produce the final classification results. Last, the proposed framework is validated on two brain disorder diagnostic tasks. Experimental results show that the proposed framework can achieve state-of-the-art performance.

IEEE Transactions on Medical ImagingVol. 44(6)
Shenzhen University (CN), University of Michigan–Dearborn (US), Shenzhen University Health Science Center (CN), Shenzhen Institutes of Advanced Technology (CN), Shenzhen Second People's Hospital (CN), University of Sheffield (GB)
National Natural Science Foundation of China, National Key Research and Development Program of China
Openalex Percentile: Top 20%
Brain Tumor Detection and Classification
1.24
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