Rvisdiff: An R package for interactive visualization of differential expression

Rvisdiff is an R/Bioconductor package that generates an interactive interface for the interpretation of differential expression results. It creates a local web page that enables the exploration of statistical analysis results through the generation of auto-analytical visualizations. Users can explore the differential expression results and the source expression data interactively in the same view. As input, the package supports the results of popular differential expression packages such as DESeq2, edgeR, and limma. As output, the package generates a local HTML page that can be easily viewed in a web browser. Rvisdiff is freely available at https://bioconductor.org/packages/Rvisdiff/.

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Publication Details

Journal
Frontiers in Bioinformatics
Published
2024-09-02
DOI
https://doi.org/10.3389/fbinf.2024.1349205
Citations
2
Primary Topic
Gene expression and cancer classification
Type
article
Field-Weighted Citation Impact
0.47

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article

Rvisdiff: An R package for interactive visualization of differential expression

David Barrios, Carlos Alberto Vanegas Prieto
2 citations
Frontiers in Bioinformatics
Gene expression and cancer classification
0.47
article

Rvisdiff: An R package for interactive visualization of differential expression

David Barrios, Carlos Alberto Vanegas Prieto
article en
2 citations

Abstract

Rvisdiff is an R/Bioconductor package that generates an interactive interface for the interpretation of differential expression results. It creates a local web page that enables the exploration of statistical analysis results through the generation of auto-analytical visualizations. Users can explore the differential expression results and the source expression data interactively in the same view. As input, the package supports the results of popular differential expression packages such as DESeq2, edgeR, and limma. As output, the package generates a local HTML page that can be easily viewed in a web browser. Rvisdiff is freely available at https://bioconductor.org/packages/Rvisdiff/.

Frontiers in BioinformaticsVol. 4
Universidad de Salamanca (ES)
Ministerio de Ciencia, Innovación y Universidades, Ministerio de Ciencia e Innovación, European Social Fund
Openalex Percentile: Top 35%
Gene expression and cancer classification
0.47
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