Breast cancer promotes the expression of neurotransmitter receptor related gene groups and image simulation of prognosis model

Breast cancer (BC), a prevalent and severe malignancy, detrimentally affects women globally. Its prognostic implications are profoundly influenced by gene expression patterns. This study retrieved 509 BCE-associated oncogenes and 1,012 neurotransmitter receptor-related genes from the GSEA and KEGG databases, intersecting to identify 98 relevant genes. Clinical and transcriptomic expression data related to BC were downloaded from the TCGA, and differential genes were identified based on an FDR value <0.05 & |log2FC| ≥ 0.585. Univariate analysis of these genes revealed that high expression of NSF and low expression of HRAS, KIF17, and RPS6KA1 are closely associated with BC survival prognosis. A prognostic model constructed for these four genes demonstrated significant prognostic relevance for BC-TCGA patients (P < 0.001). Subsequently, an immunofunctional analysis of the BC oncogene-neurotransmitter receptor-related gene cluster revealed the involvement of immune cells such as T cells CD8, T cells CD4 memory resting, and Macrophages M2. Further analysis indicated that immune functions were primarily concentrated in APC_co_inhibition, APC_co_stimulation, CCR, and Check-point, among others. Lastly, a prognostic nomogram model was established, and ROC curve analysis revealed that the nomogram is a vital indicator for assessing BC prognosis, with 1-year, 3-year, and 5-year survival rates of 0.981, 0.897, and 0.802, respectively. This model demonstrates high calibration, clinical utility, and predictive capability, promising to offer an effective preliminary tool for clinical diagnostics.

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Publication Details

Journal
SLAS TECHNOLOGY
Published
2024-08-31
DOI
https://doi.org/10.1016/j.slast.2024.100183
Citations
5
Primary Topic
Cancer, Stress, Anesthesia, and Immune Response
Type
article
Field-Weighted Citation Impact
1.93
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article

Breast cancer promotes the expression of neurotransmitter receptor related gene groups and image simulation of prognosis model

Xi Tang, Shuting Qin, Zhongxin Guo, Linjie Lu et al.
5 citations
SLAS TECHNOLOGY
Cancer, Stress, Anesthesia, and Immune Response
1.93
article

Breast cancer promotes the expression of neurotransmitter receptor related gene groups and image simulation of prognosis model

Xi Tang, Shuting Qin, Zhongxin Guo, Linjie Lu, Guohe Tan, Shenli Huang
article en
5 citations

Abstract

Breast cancer (BC), a prevalent and severe malignancy, detrimentally affects women globally. Its prognostic implications are profoundly influenced by gene expression patterns. This study retrieved 509 BCE-associated oncogenes and 1,012 neurotransmitter receptor-related genes from the GSEA and KEGG databases, intersecting to identify 98 relevant genes. Clinical and transcriptomic expression data related to BC were downloaded from the TCGA, and differential genes were identified based on an FDR value <0.05 & |log2FC| ≥ 0.585. Univariate analysis of these genes revealed that high expression of NSF and low expression of HRAS, KIF17, and RPS6KA1 are closely associated with BC survival prognosis. A prognostic model constructed for these four genes demonstrated significant prognostic relevance for BC-TCGA patients (P < 0.001). Subsequently, an immunofunctional analysis of the BC oncogene-neurotransmitter receptor-related gene cluster revealed the involvement of immune cells such as T cells CD8, T cells CD4 memory resting, and Macrophages M2. Further analysis indicated that immune functions were primarily concentrated in APC_co_inhibition, APC_co_stimulation, CCR, and Check-point, among others. Lastly, a prognostic nomogram model was established, and ROC curve analysis revealed that the nomogram is a vital indicator for assessing BC prognosis, with 1-year, 3-year, and 5-year survival rates of 0.981, 0.897, and 0.802, respectively. This model demonstrates high calibration, clinical utility, and predictive capability, promising to offer an effective preliminary tool for clinical diagnostics.

SLAS TECHNOLOGYVol. 29(5)
Guangxi Medical University (CN), Fourth Affiliated Hospital of Guangxi Medical University (CN)
Good health and well-being
Openalex Percentile: Top 13%
Cancer, Stress, Anesthesia, and Immune Response
1.93
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Breast cancer promotes the expression of neurotransmitter receptor related gene groups and image simulation of prognosis model — Xi Tang, Shuting Qin, et al. · SLAS TECHNOLOGY (2024) | TGRS Research Map | TGRS