Actinomycetospora aeridis sp. nov., Actinomycetospora flava sp. nov. and Actinomycetospora aurantiaca sp. nov., endophytic actinobacteria isolated from wild orchid (Aerides multiflora Roxb)
Three novel mycelium-forming actinobacteria, designated OC33-EN06<sup>T</sup>, OC33-EN07<sup>T</sup>, and OC33-EN08<sup>T</sup>, were isolated from wild orchid (<i>Aerides multiflora</i> Roxb), collected from a hill evergreen forest in Northern Thailand. Strains OC33-EN06<sup>T</sup> and OC33-EN07<sup>T</sup> showed the highest 16S rRNA gene similarity with <i>Actinomycetospora lutea</i> TT00-04<sup>T</sup>, 99.17 and 99.45%, respectively. Strain OC33-EN08<sup>T</sup> showed high similarity with four species, namely '<i>Actinomycetospora termitidis</i> Odt1-22<sup>T</sup>' (99.37%), <i>Actinomycetospora chiangmaiensis</i> DSM 45062<sup>T</sup> (99.02%), <i>Actinomycetospora corticicola</i> 014-5<sup>T</sup> (99.02%), and <i>Actinomycetospora soli</i> SF1<sup>T</sup> (98.81%). Comparative genome analysis of OC33-EN06<sup>T</sup>, OC33-EN07<sup>T</sup>, and OC33-EN08<sup>T</sup> with the closely related type strains showed that average nucleotide identity (ANI) based on blast, ANI based on MUMmer, and average amino acid identity values were less than 95% and the digital DNA-DNA hybridization values were less than 70%, all below the thresholds for species demarcation. The digital G+C content of OC33-EN06<sup>T</sup>, OC33-EN07<sup>T</sup>, and OC33-EN08<sup>T</sup> were 74.5, 74, and 74 mol%, respectively. These three strains developed bud-like chains of non-motile cylindrical spores with a smooth surface. The cell-wall peptidoglycan contained <i>meso</i>-diaminopimelic acid. The whole-cell sugars contained ribose, arabinose, and galactose. The predominant menaquinone was MK-8(H<sub>4</sub>). The phospholipid profile included phosphatidylcholine, phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, and phosphatidylinositol. Based on comparative analysis of genotypic, phenotypic and chemotaxonomic data, strains OC33-EN06<sup>T</sup> (=TBRC 18349<sup>T</sup>=NBRC 116543<sup>T</sup>), OC33-EN07<sup>T</sup> (=TBRC 18350<sup>T</sup>=NBRC 116544<sup>T</sup>), and OC33-EN08<sup>T</sup> (=TBRC 18318<sup>T</sup>=NBRC 116542<sup>T</sup>) represent the type strains of three novel species of the genus <i>Actinomycetospora</i> for which the names <i>Actinomycetospora aeridis</i> sp. nov., <i>Actinomycetospora flava</i> sp. nov., and <i>Actinomycetospora aurantiaca</i> sp. nov., are proposed.
Authors
- Chatsuda Sakdapetsiri (ORCID: https://orcid.org/0000-0002-4092-6575)
- Tawanmol Pujchakarn
- Chanwit Suriyachadkun (ORCID: https://orcid.org/0000-0002-1541-3444)
- Chanjira Ayawong
- Wipaporn Ngaemthao
- Suwanee Chunhametha
- Kamonchai Chairote
Institutions
- National Science and Technology Development Agency (TH)
- Kasetsart University (TH)
- National Center for Genetic Engineering and Biotechnology (TH)
Publication Details
- Journal
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Published
- 2024-08-30
- DOI
- https://doi.org/10.1099/ijsem.0.006505
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Science and Technology Development Agency
- National Research Council of Thailand
- National Center for Genetic Engineering and Biotechnology