Unveiling disulfidptosis-related biomarkers and predicting drugs in Alzheimer’s disease

Alzheimer's disease is the predominant form of dementia, and disulfidptosis is the latest reported mode of cell death that impacts various disease processes. This study used bioinformatics to analyze genes associated with disulfidptosis in Alzheimer's disease comprehensively. Based on the public datasets, the differentially expressed genes associated with disulfidptosis were identified, and immune cell infiltration was investigated through correlation analysis. Subsequently, hub genes were determined by a randomforest model. A prediction model was constructed using logistic regression. In addition, the drug-target affinity was predicted by a graph neural network model, and the results were validated by molecular docking. Five hub genes (PPEF1, NEUROD6, VIP, NUPR1, and GEM) were identified. The gene set showed significant enrichment for AD-related pathways. The logistic regression model demonstrated an AUC of 0.952, with AUC values of 0.916 and 0.864 in validated datasets. The immune infiltration analysis revealed significant heterogeneity between the Alzheimer's disease and control groups. High-affinity drugs for hub genes were identified. Through our study, a disease prediction model was constructed using potential biomarkers, and drugs targeting the genes were predicted. These results contribute to further understanding of the molecular mechanisms underlying Alzheimer's disease.

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Publication Details

Journal
Scientific Reports
Published
2024-08-30
DOI
https://doi.org/10.1038/s41598-024-70893-7
Citations
8
Primary Topic
Alzheimer's disease research and treatments
Type
article
Field-Weighted Citation Impact
2.61

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article

Unveiling disulfidptosis-related biomarkers and predicting drugs in Alzheimer’s disease

Zhengtai Li, Xinyun Zhang, Yitong Lv, Yifan Li et al.
8 citations
Scientific Reports
Alzheimer's disease research and treatments
2.61
article

Unveiling disulfidptosis-related biomarkers and predicting drugs in Alzheimer’s disease

Zhengtai Li, Xinyun Zhang, Yitong Lv, Yifan Li, Yingji Li, Changyuan Yu, Lei Huang
article en
8 citations

Abstract

Alzheimer's disease is the predominant form of dementia, and disulfidptosis is the latest reported mode of cell death that impacts various disease processes. This study used bioinformatics to analyze genes associated with disulfidptosis in Alzheimer's disease comprehensively. Based on the public datasets, the differentially expressed genes associated with disulfidptosis were identified, and immune cell infiltration was investigated through correlation analysis. Subsequently, hub genes were determined by a randomforest model. A prediction model was constructed using logistic regression. In addition, the drug-target affinity was predicted by a graph neural network model, and the results were validated by molecular docking. Five hub genes (PPEF1, NEUROD6, VIP, NUPR1, and GEM) were identified. The gene set showed significant enrichment for AD-related pathways. The logistic regression model demonstrated an AUC of 0.952, with AUC values of 0.916 and 0.864 in validated datasets. The immune infiltration analysis revealed significant heterogeneity between the Alzheimer's disease and control groups. High-affinity drugs for hub genes were identified. Through our study, a disease prediction model was constructed using potential biomarkers, and drugs targeting the genes were predicted. These results contribute to further understanding of the molecular mechanisms underlying Alzheimer's disease.

Scientific ReportsVol. 14(1)
Bioscience (China) (CN), Beijing University of Chemical Technology (CN)
National Natural Science Foundation of China, Xinjiang Production and Construction Corps, Fundamental Research Funds for the Central Universities
Openalex Percentile: Top 10%
Alzheimer's disease research and treatments
2.61
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