The complete mitochondrial genome of <i>Pachylophus rufescen</i> s (de Meijere, 1904) (Diptera:Chloropidae)

<i>Pachylophus</i> belongs to the subfamily Chloropinae, the second most diverse subfamily of Chloropidae. However, there have been few complete mitochondrial genomes of Chloropinae reported in the public database. Consequently, we sequenced and annotated the complete mitochondrial genome of <i>Pachylophus rufescens</i> (de Meijere, 1904). The whole mitochondrial genome is 17, 926 bp in length, consisting of 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs) and two ribosomal RNAs (rRNAs). The mitochondrial genome exhibits high A + T bias, accounting for 79.7% of its entirety. All PCGs start with ATN codon and end with TAN or incomplete stop codon TA or single T. The Maximum likelihood phylogenetic tree revealed a close relationship between <i>Pachylophus</i> and <i>Cetema</i>. This study contributes to the expansion of the mitochondrial genome library of Chloropinae, providing a valuable resource for gaining insights into the evolutionary history of Chloropidae.

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Publication Details

Journal
Mitochondrial DNA Part B
Published
2024-08-30
DOI
https://doi.org/10.1080/23802359.2024.2397985
Primary Topic
Diptera species taxonomy and behavior
Type
article
Field-Weighted Citation Impact
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article

The complete mitochondrial genome of Pachylophus rufescen s (de Meijere, 1904) (Diptera:Chloropidae)

Xiaodong Cai, Jiuzhou Liu, Ding Yang, Xiaoyan Liu
Mitochondrial DNA Part B
Diptera species taxonomy and behavior
article

The complete mitochondrial genome of Pachylophus rufescen s (de Meijere, 1904) (Diptera:Chloropidae)

Xiaodong Cai, Jiuzhou Liu, Ding Yang, Xiaoyan Liu
article en

Abstract

<i>Pachylophus</i> belongs to the subfamily Chloropinae, the second most diverse subfamily of Chloropidae. However, there have been few complete mitochondrial genomes of Chloropinae reported in the public database. Consequently, we sequenced and annotated the complete mitochondrial genome of <i>Pachylophus rufescens</i> (de Meijere, 1904). The whole mitochondrial genome is 17, 926 bp in length, consisting of 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs) and two ribosomal RNAs (rRNAs). The mitochondrial genome exhibits high A + T bias, accounting for 79.7% of its entirety. All PCGs start with ATN codon and end with TAN or incomplete stop codon TA or single T. The Maximum likelihood phylogenetic tree revealed a close relationship between <i>Pachylophus</i> and <i>Cetema</i>. This study contributes to the expansion of the mitochondrial genome library of Chloropinae, providing a valuable resource for gaining insights into the evolutionary history of Chloropidae.

Mitochondrial DNA Part BVol. 9(9)
Huazhong Agricultural University (CN), China Agricultural University (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 90%
Diptera species taxonomy and behavior
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