4-Methoxypicolinic Acid <i>N</i>-Oxide: One of the Shortest Hydrogen Bonds Known Characterized by Neutron Diffraction, Inelastic Neutron Scattering, Infrared Spectroscopy, and Periodic DFT Calculations

The present work focuses on the case of an extremely short intramolecular O-H···O hydrogen bond (H-bond) found in 4-methoxypicolinic acid <i>N</i>-oxide (MPANO). The donor···acceptor separation of 2.403 Å makes the H-bond in MPANO one of the shortest H-bonds known. We elucidated the structure and dynamics of the H-bond by two neutron-based techniques, namely, single-crystal diffraction and inelastic scattering (INS) vibrational spectroscopy. We also utilized conventional infrared (IR) spectroscopy as well as quantum chemical computations on isolated and periodic models. Both the protiated and deuterated variants of MPANO were investigated by INS and IR. All the methods used unequivocally confirm the existence of an extremely short, asymmetric H-bond, with the proton located near yet off the midpoint. The main relevant feature of the IR spectrum is an extremely broad, complex, and red-shifted OH (OD) stretching band spanning between 1800 and 500 cm<sup>-1</sup> and centered at about 1360 cm<sup>-1</sup>, which indicates the presence of extensive anharmonicity and coupling with other H-bond modes. Of the modes characteristic of H-bond dynamics, only the out-of-plane OH (OD) bending can clearly be detected in the INS spectra; it has a relatively high frequency indicative of the strength of the H-bond. The computed structure is in excellent agreement with the diffraction measurement when periodicity is taken into account. The calculated harmonic frequencies show a reasonable match with the observed spectral features, whereby the assignment of the IR and INS spectra is facilitated. The hydrogen stretching frequency, however, appears to be significantly overestimated, on account of the limitations of the harmonic approximation and the complex nature of the short H-bond.

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Journal
ACS Omega
Published
2024-08-29
DOI
https://doi.org/10.1021/acsomega.4c05344
Primary Topic
Crystallography and molecular interactions
Type
article
Field-Weighted Citation Impact
0.00

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article

4-Methoxypicolinic Acid N-Oxide: One of the Shortest Hydrogen Bonds Known Characterized by Neutron Diffraction, Inelastic Neutron Scattering, Infrared Spectroscopy, and Periodic DFT Calculations

Sax A. Mason, Jože Grdadolnik, Alberto Albinati, Jernej Stare et al.
ACS Omega
Crystallography and molecular interactions
article

4-Methoxypicolinic Acid N-Oxide: One of the Shortest Hydrogen Bonds Known Characterized by Neutron Diffraction, Inelastic Neutron Scattering, Infrared Spectroscopy, and Periodic DFT Calculations

Sax A. Mason, Jože Grdadolnik, Alberto Albinati, Jernej Stare, Juergen Eckert
article en

Abstract

The present work focuses on the case of an extremely short intramolecular O-H···O hydrogen bond (H-bond) found in 4-methoxypicolinic acid <i>N</i>-oxide (MPANO). The donor···acceptor separation of 2.403 Å makes the H-bond in MPANO one of the shortest H-bonds known. We elucidated the structure and dynamics of the H-bond by two neutron-based techniques, namely, single-crystal diffraction and inelastic scattering (INS) vibrational spectroscopy. We also utilized conventional infrared (IR) spectroscopy as well as quantum chemical computations on isolated and periodic models. Both the protiated and deuterated variants of MPANO were investigated by INS and IR. All the methods used unequivocally confirm the existence of an extremely short, asymmetric H-bond, with the proton located near yet off the midpoint. The main relevant feature of the IR spectrum is an extremely broad, complex, and red-shifted OH (OD) stretching band spanning between 1800 and 500 cm<sup>-1</sup> and centered at about 1360 cm<sup>-1</sup>, which indicates the presence of extensive anharmonicity and coupling with other H-bond modes. Of the modes characteristic of H-bond dynamics, only the out-of-plane OH (OD) bending can clearly be detected in the INS spectra; it has a relatively high frequency indicative of the strength of the H-bond. The computed structure is in excellent agreement with the diffraction measurement when periodicity is taken into account. The calculated harmonic frequencies show a reasonable match with the observed spectral features, whereby the assignment of the IR and INS spectra is facilitated. The hydrogen stretching frequency, however, appears to be significantly overestimated, on account of the limitations of the harmonic approximation and the complex nature of the short H-bond.

ACS OmegaVol. 9(36)
Texas Tech University (US), University of Milan (IT), Institut Laue-Langevin (FR), Institute for the Chemistry of OrganoMetallic Compounds (IT), National Institute of Chemistry (SI)
Javna Agencija za Raziskovalno Dejavnost RS
Openalex Percentile: Top 83%
Crystallography and molecular interactions
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