Molecular characterization analysis of PANoptosis-related genes in colorectal cancer based on bioinformatic analysis

Colorectal cancer (CRC) ranks as the third most prevalent cancer globally and stands as the second principal contributor to cancer-related fatalities. Recently, emerging research has emphasized the role of pan apoptosis (PANoptosis) in tumor development and anti-tumor therapy. In the course of this investigation, we meticulously identified and conducted a correlation analysis between differentially expressed genes associated with PANoptosis in CRC (CPAN_DEGs) and the proportion of immune cells. Subsequently, we formulated a prognostic score based on the CPAN_DEGs. Further our analysis revealed a noteworthy reduction in UNC5D mRNA expression within HCT116, HT29 and SW480 cells, as validated by qRT-PCR assay. Furthermore, scrutinizing the TCGA database unveiled a distinctive trend wherein individuals with the low UNC5D expression exhibited significantly reduced overall survival compared to their counterparts with the high UNC5D levels. The drug susceptibility analysis of UNC5D was further performed, which showed that UNC5D was corassociated with the sensitivity of CRC to 6-Thioguanine. The outcomes of our investigation underscore the mechanisms by which PANoptosis influences immune dysregulation as well as prognostic outcome in CRC.

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Publication Details

Journal
PLoS ONE
Published
2024-08-26
DOI
https://doi.org/10.1371/journal.pone.0307651
Citations
6
Primary Topic
Ferroptosis and cancer prognosis
Type
article
Field-Weighted Citation Impact
2.51

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article

Molecular characterization analysis of PANoptosis-related genes in colorectal cancer based on bioinformatic analysis

Tieli Peng, Liu Dong-lian, Wen Li, Ling Qi et al.
6 citations
PLoS ONE
Ferroptosis and cancer prognosis
2.51
article

Molecular characterization analysis of PANoptosis-related genes in colorectal cancer based on bioinformatic analysis

Tieli Peng, Liu Dong-lian, Wen Li, Ling Qi, Mengyang Zhang, Yubo Zhao, Yonglong Xiao
article en
6 citations

Abstract

Colorectal cancer (CRC) ranks as the third most prevalent cancer globally and stands as the second principal contributor to cancer-related fatalities. Recently, emerging research has emphasized the role of pan apoptosis (PANoptosis) in tumor development and anti-tumor therapy. In the course of this investigation, we meticulously identified and conducted a correlation analysis between differentially expressed genes associated with PANoptosis in CRC (CPAN_DEGs) and the proportion of immune cells. Subsequently, we formulated a prognostic score based on the CPAN_DEGs. Further our analysis revealed a noteworthy reduction in UNC5D mRNA expression within HCT116, HT29 and SW480 cells, as validated by qRT-PCR assay. Furthermore, scrutinizing the TCGA database unveiled a distinctive trend wherein individuals with the low UNC5D expression exhibited significantly reduced overall survival compared to their counterparts with the high UNC5D levels. The drug susceptibility analysis of UNC5D was further performed, which showed that UNC5D was corassociated with the sensitivity of CRC to 6-Thioguanine. The outcomes of our investigation underscore the mechanisms by which PANoptosis influences immune dysregulation as well as prognostic outcome in CRC.

PLoS ONEVol. 19(8)
Dali University (CN), Guangzhou Medical University (CN)
Basic and Applied Basic Research Foundation of Guangdong Province
Good health and well-being
Openalex Percentile: Top 10%
Ferroptosis and cancer prognosis
2.51
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